RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 FILIP1Q7Z7B0 1213 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 CDHR2Q9BYE9 1310 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 ADD2P35612 726 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 NECTIN1Q15223 517 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 CABP5Q9NP86 173 aa10.74□□□□□ -0.69
TMEM39A-201ENST00000319172 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 POLD1P28340 1107 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 DYNLL1P63167 89 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 PPARAQ07869 468 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 CNNM3Q8NE01 707 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 FEZ1Q99689 392 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 CAMTA2O94983 1202 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 LARGE1O95461 756 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 BRD1O95696 1058 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 ADD1P35611 737 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 C2CD5Q86YS7 1000 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 GTF3C6Q969F1 213 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 CYP2E1P05181 493 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 ZNF76P36508 570 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 TCP10Q12799 353 aa10.73□□□□□ -0.69
TMEM39A-201ENST00000319172 MMP10P09238 476 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 RFX5P48382 616 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 SCNN1DP51172 638 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 IL25Q9H293 177 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 RGS12O14924 1447 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 LCORLQ8N3X6 602 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 BSDC1Q9NW68 430 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 MINPP1Q9UNW1 487 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 TTF2Q9UNY4 1162 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 XRCC6P12956 609 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 PDE6BP35913 854 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 TXNRD1Q16881 649 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 RIPOR2Q9Y4F9 1068 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 V9GY48 417 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 XDHP47989 1333 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 SPTLC2O15270 562 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 NFIXQ14938 502 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 LARGE2Q8N3Y3 721 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 FLAD1Q8NFF5 587 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 HDAC9Q9UKV0 1011 aa10.72□□□□□ -0.69
TMEM39A-201ENST00000319172 RTL9Q8NET4 1388 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 TFAP4Q01664 338 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 KIAA0825Q8IV33 1275 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 MYO1BO43795 1136 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 ZNF165P49910 485 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 LRSAM1Q6UWE0 723 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 NOC3LQ8WTT2 800 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 KIF2CQ99661 725 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 ANO10Q9NW15 660 aa10.71□□□□□ -0.69
TMEM39A-201ENST00000319172 PXDNLA1KZ92 1463 aa10.71□□□□□ -0.7
TMEM39A-201ENST00000319172 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.7
TMEM39A-201ENST00000319172 KCNG4Q8TDN1 519 aa10.71□□□□□ -0.7
TMEM39A-201ENST00000319172 LLPHQ9BRT6 129 aaKnown RBP10.71□□□□□ -0.7
TMEM39A-201ENST00000319172 UTYO14607 1347 aa10.71□□□□□ -0.7
TMEM39A-201ENST00000319172 CYP2D7A0A087X1C5 515 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 CALM1P0DP23 149 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 CALM2P0DP24 149 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 CALM3P0DP25 149 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 GNAQP50148 359 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 RBM6P78332 1123 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 INTS5Q6P9B9 1019 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 PPIP5K2O43314 1243 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 SYKP43405 635 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 NAPAP54920 295 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 LMBRD1Q9NUN5 540 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 MON2Q7Z3U7 1717 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 SCRN1Q12765 414 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 GRAPQ13588 217 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 GRAPLQ8TC17 118 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 MTMR6Q9Y217 621 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 CAMTA1Q9Y6Y1 1673 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 UBN2Q6ZU65 1347 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 TBC1D22AQ8WUA7 517 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 KCNJ14Q9UNX9 436 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-201ENST00000319172 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 CSF1RP07333 972 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 PDIA3P30101 505 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 CCDC178Q5BJE1 867 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 CEP89Q96ST8 783 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 A0A1B0GVL5 298 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 ESPNB1AK53 854 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 CTAGE5O15320 804 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 KCNA4P22459 653 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms