RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PHKBQ93100 1093 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 COL24A1Q17RW2 1714 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 CENPFP49454 3210 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 ZNF831Q5JPB2 1677 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 PTPDC1A2A3K4 754 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 F13A1P00488 732 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 NAA16Q6N069 864 aaPredicted RBP8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 CDC27P30260 824 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 KRT32Q14532 448 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
LYSMD3-201ENST00000315948 MAGEB6P1A0A0J9YX57 407 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 PATL2C9JE40 543 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 ST5P78524 1137 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 RALYLQ86SE5 291 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 SLC44A5Q8NCS7 719 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 ZNF622Q969S3 477 aaKnown RBP eCLIP8.26□□□□□ -1.091e-8■□□□□ 9.7
LYSMD3-201ENST00000315948 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 MYH7P12883 1935 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 MYH13Q9UKX3 1938 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 USP17L21D6R901 530 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 ADRA2BP18089 450 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 FAM47AQ5JRC9 791 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 DYNLL2Q96FJ2 89 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 A0A1B0GUL6 1792 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 BAZ2BQ9UIF8 2168 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 CLEC17AQ6ZS10 378 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 NCOA7Q8NI08 942 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 TBC1D16Q8TBP0 767 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 SAP30BPQ9UHR5 308 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 BAZ2AQ9UIF9 1905 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-201ENST00000315948 CACNA1SQ13698 1873 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 PLSCR1O15162 318 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 ZSCAN25Q6NSZ9 544 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 SH3RF3Q8TEJ3 882 aaPredicted RBP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 ZSCAN31Q96LW9 406 aaPredicted RBP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 WDR33Q9C0J8 1336 aaKnown RBP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 SYCE3A1L190 88 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 PFKFB2O60825 505 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 SRGNP10124 158 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 XRCC6P12956 609 aaKnown RBP eCLIP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 MCM5P33992 734 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 RTN4Q9NQC3 1192 aaKnown RBP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 GNL3LQ9NVN8 582 aaKnown RBP8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 ARAP2Q8WZ64 1704 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 GUCY1A2P33402 732 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 IGDCC4Q8TDY8 1250 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 PIBF1Q8WXW3 757 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 AGXT2Q9BYV1 514 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 XDHP47989 1333 aa8.25□□□□□ -1.09
LYSMD3-201ENST00000315948 PPARAQ07869 468 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 ILDR1Q86SU0 546 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 CD209Q9NNX6 404 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 CTNNA3Q9UI47 895 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 SCNN1DP51172 638 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 GTF2IP78347 998 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 ZSCAN23Q3MJ62 389 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 CTR9Q6PD62 1173 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 TTC6Q86TZ1 520 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 LY9Q9HBG7 655 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 POLR3DP05423 398 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 ANKRD1Q15327 319 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 DZIP1Q86YF9 867 aaKnown RBP8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 CAMKK2Q96RR4 588 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 ANKRD2Q9GZV1 360 aa8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 FAM217BQ9NTX9 383 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-201ENST00000315948 A0A087WWV3 80 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 SH2B2O14492 632 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 RANBP6O60518 1105 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 LRRFIP1Q32MZ4 808 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 TMEM67Q5HYA8 995 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 MAPKAPK5Q8IW41 473 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 CERS5Q8N5B7 392 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 RNF214Q8ND24 703 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 DCP1AQ9NPI6 582 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 IFIT3O14879 490 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 CACNB3P54284 484 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 KLHL40Q2TBA0 621 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 MFSD14BQ5SR56 506 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 APOA5Q6Q788 366 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 MFSD6Q6ZSS7 791 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 TDRD7Q8NHU6 1098 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 TGFBRAP1Q8WUH2 860 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 NUP133Q8WUM0 1156 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 RBM17Q96I25 401 aaKnown RBP8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 KIF28PB7ZC32 967 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 GOLGA6L22H0YM25 854 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 PLCD1P51178 756 aa8.23□□□□□ -1.09
LYSMD3-201ENST00000315948 TRDNQ13061 729 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms