RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PPP2R3BQ9Y5P8 575 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 MAST2Q6P0Q8 1798 aa21.63■■□□□ 1.05
SSSCA1-201ENST00000309328 TRIM6-TRIM34B2RNG4 842 aa21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 ADD2P35612 726 aa21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 BTDP43251 543 aa21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 TNNI2P48788 182 aa21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
SSSCA1-201ENST00000309328 HIP1O00291 1037 aa21.61■■□□□ 1.05
SSSCA1-201ENST00000309328 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
SSSCA1-201ENST00000309328 ANGEL2Q5VTE6 544 aaKnown RBP21.61■■□□□ 1.05
SSSCA1-201ENST00000309328 ZNF384Q8TF68 577 aa21.61■■□□□ 1.05
SSSCA1-201ENST00000309328 ZNF70Q9UC06 446 aaPredicted RBP21.61■■□□□ 1.05
SSSCA1-201ENST00000309328 ZNF532Q9HCE3 1301 aa21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 RNF113AO15541 343 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 KRT26Q7Z3Y9 468 aa21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 FAM83AQ86UY5 434 aa21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 USP40Q9NVE5 1235 aa21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 ADAMTSL1Q8N6G6 1762 aa21.6■■□□□ 1.05
SSSCA1-201ENST00000309328 TCRBV5S4A2TA0A5A2 114 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 CDC42EP5Q6NZY7 148 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 APPBP2Q92624 585 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 IDI2Q9BXS1 227 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 VEZTQ9HBM0 779 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 DOCK2Q92608 1830 aa21.59■■□□□ 1.05
SSSCA1-201ENST00000309328 POTEIP0CG38 1075 aa21.58■■□□□ 1.05
SSSCA1-201ENST00000309328 POTEJP0CG39 1038 aa21.58■■□□□ 1.05
SSSCA1-201ENST00000309328 RILPL2Q969X0 211 aa21.58■■□□□ 1.05
SSSCA1-201ENST00000309328 MAGEB6P1A0A0J9YX57 407 aa21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 MAP1SQ66K74 1059 aaPredicted RBP21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 HOOK2Q96ED9 719 aa21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 AATFQ9NY61 560 aaKnown RBP eCLIP21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 PCDHAC2Q9Y5I4 1007 aa21.57■■□□□ 1.04
SSSCA1-201ENST00000309328 CLRN2A0PK11 232 aa21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 ENTPD3O75355 529 aa21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 RHBDL3P58872 404 aa21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 DEFB129Q9H1M3 183 aa21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 RPAP1Q9BWH6 1393 aaPredicted RBP21.56■■□□□ 1.04
SSSCA1-201ENST00000309328 ADGRA1Q86SQ6 560 aa21.55■■□□□ 1.04
SSSCA1-201ENST00000309328 TEX11Q8IYF3 940 aa21.55■■□□□ 1.04
SSSCA1-201ENST00000309328 CRNKL1Q9BZJ0 848 aaKnown RBP21.55■■□□□ 1.04
SSSCA1-201ENST00000309328 GSPT1P15170 499 aaKnown RBP21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 GNAT2P19087 354 aa21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 NF2P35240 595 aa21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 MIGA1Q8NAN2 632 aa21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 RIOK1Q9BRS2 568 aaKnown RBP21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 HELLSQ9NRZ9 838 aa21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 ASTN2O75129 1339 aaPredicted RBP21.54■■□□□ 1.04
SSSCA1-201ENST00000309328 MYH2Q9UKX2 1941 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 SDSP20132 328 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 RGS3P49796 1198 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 MFAP1P55081 439 aaKnown RBP21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 RASA3Q14644 834 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 SUPT20HL1Q3ZLR7 823 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 ZMYM1Q5SVZ6 1142 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 USP48Q86UV5 1035 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 FAM151AQ8WW52 585 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 DDRGK1Q96HY6 314 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 DIAPH3Q9NSV4 1193 aa21.53■■□□□ 1.04
SSSCA1-201ENST00000309328 TCP10L2B9ZVM9 353 aa21.52■■□□□ 1.04
SSSCA1-201ENST00000309328 WDHD1O75717 1129 aaPredicted RBP21.52■■□□□ 1.04
SSSCA1-201ENST00000309328 SH3RF3Q8TEJ3 882 aaPredicted RBP21.52■■□□□ 1.04
SSSCA1-201ENST00000309328 GLIS2Q9BZE0 524 aaPredicted RBP21.52■■□□□ 1.04
SSSCA1-201ENST00000309328 COL2A1P02458 1487 aaPredicted RBP21.52■■□□□ 1.03
SSSCA1-201ENST00000309328 ECM29Q5VYK3 1845 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 MBD4O95243 580 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 RUFY2Q8WXA3 655 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 DHX36Q9H2U1 1008 aaKnown RBP21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 ATP8A2Q9NTI2 1148 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 TAOK2Q9UL54 1235 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
SSSCA1-201ENST00000309328 USP5P45974 858 aa21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 FKBP1BP68106 108 aa21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 GIMAP6Q6P9H5 292 aa21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 OSBP2Q969R2 916 aa21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 PUS7LQ9H0K6 701 aaKnown RBP21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 FAM198AQ9UFP1 575 aa21.5■■□□□ 1.03
SSSCA1-201ENST00000309328 ATRNL1Q5VV63 1379 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 ADM5C9JUS6 153 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 CACNB3P54284 484 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 DYNLL1P63167 89 aaKnown RBP21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 NFIAQ12857 509 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 CDCA5Q96FF9 252 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 RAD50Q92878 1312 aa21.49■■□□□ 1.03
SSSCA1-201ENST00000309328 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 GPAA1O43292 621 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 AMOTL1Q8IY63 956 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 LCORLQ8N3X6 602 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 TGFBRAP1Q8WUH2 860 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 OSBPL5Q9H0X9 879 aaPredicted RBP21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 FLT1P17948 1338 aa21.48■■□□□ 1.03
SSSCA1-201ENST00000309328 PICALMQ13492 652 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms