RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SPTY2D1Q68D10 685 aaPredicted RBP20.98■□□□□ 0.95
HMGCLL1-202ENST00000308161 MCOLN1Q9GZU1 580 aa20.98■□□□□ 0.95
HMGCLL1-202ENST00000308161 HMG20BQ9P0W2 317 aa20.98■□□□□ 0.95
HMGCLL1-202ENST00000308161 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 MANSC4A6NHS7 340 aaPredicted RBP20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 UNCXA6NJT0 531 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 GJA5P36382 358 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 MAP3K9P80192 1104 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 NFIAQ12857 509 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 TNNI3KQ59H18 835 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 CEP85Q6P2H3 762 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 TBC1D9Q6ZT07 1266 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 ERICH6Q7L0X2 663 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 SPATA5Q8NB90 893 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 COG6Q9Y2V7 657 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 CSADQ9Y600 493 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 FPGT-TNNI3KV9GXZ4 949 aa20.97■□□□□ 0.95
HMGCLL1-202ENST00000308161 PDS5AQ29RF7 1337 aaKnown RBP20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 VGLL4Q14135 290 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 TTC39AQ5SRH9 613 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 MIGA2Q7L4E1 593 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 CNKSR2Q8WXI2 1034 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 OPTNQ96CV9 577 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 WRNIP1Q96S55 665 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 DBNDD2Q9BQY9 259 aa20.96■□□□□ 0.95
HMGCLL1-202ENST00000308161 UQCRFS1P1P0C7P4 283 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 ARID4AP29374 1257 aaPredicted RBP20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 SLF2Q8IX21 1173 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 FAM151AQ8WW52 585 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 HOOK2Q96ED9 719 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 SNRKQ9NRH2 765 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 RAI14Q9P0K7 980 aa20.95■□□□□ 0.94
HMGCLL1-202ENST00000308161 MYH2Q9UKX2 1941 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 CCDC85CA6NKD9 419 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 MCAMP43121 646 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 BTDP43251 543 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 MECOMQ03112 1051 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 CCDC158Q5M9N0 1113 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 DCAF15Q66K64 600 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 OTUD5Q96G74 571 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 GPR108Q9NPR9 543 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 FAM198AQ9UFP1 575 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 GAKO14976 1311 aa20.94■□□□□ 0.94
HMGCLL1-202ENST00000308161 RPAP1Q9BWH6 1393 aaPredicted RBP20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZBTB22O15209 634 aa20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 IFNL1Q8IU54 200 aa20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZKSCAN4Q969J2 545 aaPredicted RBP20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 NOP58Q9Y2X3 529 aaKnown RBP20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 MROH7-TTC4A0A0A0MT08 1334 aa20.93■□□□□ 0.94
HMGCLL1-202ENST00000308161 AK9Q5TCS8 1911 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 IGF2BP3O00425 579 aaKnown RBP eCLIP20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 RGS3P49796 1198 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 INHBEP58166 350 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 PICALMQ13492 652 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZSCAN29Q8IWY8 852 aaPredicted RBP20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZFPM1Q8IX07 1006 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 ZNF341Q9BYN7 854 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 CCDC8Q9H0W5 538 aaPredicted RBP20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 R3HDMLQ9H3Y0 253 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 LRP2BPQ9P2M1 347 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
HMGCLL1-202ENST00000308161 GPR25O00155 361 aa20.91■□□□□ 0.94
HMGCLL1-202ENST00000308161 ALDH1A1P00352 501 aa20.91■□□□□ 0.94
HMGCLL1-202ENST00000308161 TLR7Q9NYK1 1049 aaKnown RBP20.91■□□□□ 0.94
HMGCLL1-202ENST00000308161 APBB1O00213 710 aa20.9■□□□□ 0.94
HMGCLL1-202ENST00000308161 GSTO1P78417 241 aa20.9■□□□□ 0.94
HMGCLL1-202ENST00000308161 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
HMGCLL1-202ENST00000308161 SNCAIPQ9Y6H5 919 aa20.9■□□□□ 0.94
HMGCLL1-202ENST00000308161 LDHCP07864 332 aa20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 INPP5BP32019 993 aa20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 CTU1Q7Z7A3 348 aaKnown RBP20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 ZNF384Q8TF68 577 aa20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 NSUN4Q96CB9 384 aaKnown RBP20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 EAF2Q96CJ1 260 aaPredicted RBP20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 FAM163AQ96GL9 167 aaPredicted RBP20.89■□□□□ 0.93
HMGCLL1-202ENST00000308161 CCL15-CCL14A0A0B4J2E2 113 aa20.88■□□□□ 0.93
HMGCLL1-202ENST00000308161 SPDYE5A6NIY4 337 aa20.88■□□□□ 0.93
HMGCLL1-202ENST00000308161 CCL15Q16663 113 aa20.88■□□□□ 0.93
HMGCLL1-202ENST00000308161 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
HMGCLL1-202ENST00000308161 IDI2Q9BXS1 227 aa20.88■□□□□ 0.93
HMGCLL1-202ENST00000308161 GPR75-ASB3A0A0A6YYF3 556 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 FKTNO75072 461 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 ENTPD3O75355 529 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 WDHD1O75717 1129 aaPredicted RBP20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 GTF2A2P52657 109 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 C20orf194Q5TEA3 1177 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 AACSQ86V21 672 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 ERO1BQ86YB8 467 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 PTPN18Q99952 460 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 IL1RAPL2Q9NP60 686 aa20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 DDX4Q9NQI0 724 aaKnown RBP20.87■□□□□ 0.93
HMGCLL1-202ENST00000308161 ZAP70P43403 619 aa20.86■□□□□ 0.93
HMGCLL1-202ENST00000308161 BRI3BPQ8WY22 251 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms