RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SLC26A6Q9BXS9 759 aa19.15■□□□□ 0.66
SSH3-201ENST00000308127 ADKP55263 362 aaKnown RBP19.14■□□□□ 0.65
SSH3-201ENST00000308127 BRAPQ7Z569 592 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 DESI2Q9BSY9 194 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 GPR108Q9NPR9 543 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 PIH1D3Q9NQM4 214 aaKnown RBP19.14■□□□□ 0.65
SSH3-201ENST00000308127 IMPACTQ9P2X3 320 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 NWD2Q9ULI1 1742 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 POLR3GO15318 223 aaPredicted RBP19.14■□□□□ 0.65
SSH3-201ENST00000308127 RANBP6O60518 1105 aaKnown RBP19.14■□□□□ 0.65
SSH3-201ENST00000308127 BMP6P22004 513 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 ZSWIM4Q9H7M6 989 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 WWC3Q9ULE0 1092 aa19.14■□□□□ 0.65
SSH3-201ENST00000308127 LDHAL6AQ6ZMR3 332 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 CNNM3Q8NE01 707 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 GREM2Q9H772 168 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 STRN4Q9NRL3 753 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 EVCP57679 992 aa19.13■□□□□ 0.65
SSH3-201ENST00000308127 ANGEL1Q9UNK9 670 aaKnown RBP19.13■□□□□ 0.65
SSH3-201ENST00000308127 PHRF1Q9P1Y6 1649 aaKnown RBP19.12■□□□□ 0.65
SSH3-201ENST00000308127 COBLO75128 1261 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 TOP1P11387 765 aaKnown RBP19.12■□□□□ 0.65
SSH3-201ENST00000308127 MYL5Q02045 173 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
SSH3-201ENST00000308127 APOA5Q6Q788 366 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 CNNM1Q9NRU3 951 aa19.12■□□□□ 0.65
SSH3-201ENST00000308127 BTBD18B2RXH4 712 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 ATF3P18847 181 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 ETF1P62495 437 aaKnown RBP19.11■□□□□ 0.65
SSH3-201ENST00000308127 KARSQ15046 597 aaKnown RBP19.11■□□□□ 0.65
SSH3-201ENST00000308127 MNS1Q8NEH6 495 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 L2HGDHQ9H9P8 463 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 ZNF532Q9HCE3 1301 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 GOLGA8AA7E2F4 631 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 CASP1P29466 404 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 PHKA1P46020 1223 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 PTPAQ15257 358 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 IRX2Q9BZI1 471 aaPredicted RBP19.11■□□□□ 0.65
SSH3-201ENST00000308127 hCG_1642624A0A1W2PR95 340 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 HLFQ16534 295 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 CCDC93Q567U6 631 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 TRIM65Q6PJ69 517 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 ZCRB1Q8TBF4 217 aaKnown RBP19.11■□□□□ 0.65
SSH3-201ENST00000308127 WDR24Q96S15 920 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.65
SSH3-201ENST00000308127 KCNH3Q9ULD8 1083 aa19.11■□□□□ 0.65
SSH3-201ENST00000308127 IARSP41252 1262 aaKnown RBP19.1■□□□□ 0.65
SSH3-201ENST00000308127 GABPB1Q06547 395 aaPredicted RBP19.1■□□□□ 0.65
SSH3-201ENST00000308127 FMR1Q06787 632 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSH3-201ENST00000308127 TMEM67Q5HYA8 995 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 TOGARAM2Q6ZUX3 1019 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 USP49Q70CQ1 688 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 UBXN4Q92575 508 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 BPIFA3Q9BQP9 254 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 A0A0U1RQJ8 604 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 SH2B2O14492 632 aaPredicted RBP19.1■□□□□ 0.65
SSH3-201ENST00000308127 NRDCO43847 1150 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 DNAJC10Q8IXB1 793 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 ATRIPQ8WXE1 791 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 C19orf44Q9H6X5 657 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 FHOD1Q9Y613 1164 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
SSH3-201ENST00000308127 ZMYM6O95789 1325 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
SSH3-201ENST00000308127 SMIM22K7EJ46 135 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 ZBTB43O43298 467 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 CIAO1O76071 339 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 CDK11BP21127 795 aaKnown RBP19.09■□□□□ 0.65
SSH3-201ENST00000308127 ITGA6P23229 1130 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 NR5A1Q13285 461 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 MTF1Q14872 753 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 ZCCHC17Q9NP64 241 aaKnown RBP19.09■□□□□ 0.65
SSH3-201ENST00000308127 SEC31BQ9NQW1 1179 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 PRKAB2O43741 272 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 H2AFXP16104 143 aaPredicted RBP19.09■□□□□ 0.65
SSH3-201ENST00000308127 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 CPLX3Q8WVH0 158 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 CCDC34Q96HJ3 373 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 MAP3K14Q99558 947 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 AKAP2Q9Y2D5 859 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 ADAMTS7Q9UKP4 1686 aa19.09■□□□□ 0.65
SSH3-201ENST00000308127 POLR2DO15514 142 aaKnown RBP19.08■□□□□ 0.65
SSH3-201ENST00000308127 GNG11P61952 73 aa19.08■□□□□ 0.65
SSH3-201ENST00000308127 TCIRG1Q13488 830 aa19.08■□□□□ 0.65
SSH3-201ENST00000308127 TEX35Q5T0J7 233 aa19.08■□□□□ 0.65
SSH3-201ENST00000308127 ASAP1Q9ULH1 1129 aa19.08■□□□□ 0.65
SSH3-201ENST00000308127 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
SSH3-201ENST00000308127 PNMA6AP0CW24 399 aaPredicted RBP19.08■□□□□ 0.64
SSH3-201ENST00000308127 TRIM29Q14134 588 aa19.08■□□□□ 0.64
SSH3-201ENST00000308127 KLHL10Q6JEL2 608 aa19.08■□□□□ 0.64
SSH3-201ENST00000308127 VSTM4Q8IW00 320 aa19.08■□□□□ 0.64
SSH3-201ENST00000308127 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
SSH3-201ENST00000308127 FAM217BQ9NTX9 383 aaPredicted RBP19.08■□□□□ 0.64
SSH3-201ENST00000308127 TUBE1Q9UJT0 475 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms