RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 STX1AQ16623 288 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 MEX3CQ5U5Q3 659 aaKnown RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 ZNF274Q96GC6 653 aaPredicted RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 ZNF396Q96N95 335 aaPredicted RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 USP28Q96RU2 1077 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 GOLPH3LQ9H4A5 285 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 ZNF652Q9Y2D9 606 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 COL5A3P25940 1745 aaPredicted RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 SARM1Q6SZW1 724 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 SMIM5Q71RC9 77 aa18.75■□□□□ 0.59
LONRF3-201ENST00000304778 FNBP4Q8N3X1 1017 aaPredicted RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 NCOA5Q9HCD5 579 aaKnown RBP18.75■□□□□ 0.59
LONRF3-201ENST00000304778 CCDC73Q6ZRK6 1079 aa18.74■□□□□ 0.59
LONRF3-201ENST00000304778 C11orf57Q6ZUT1 292 aaPredicted RBP18.74■□□□□ 0.59
LONRF3-201ENST00000304778 ERCC4Q92889 916 aaPredicted RBP18.74■□□□□ 0.59
LONRF3-201ENST00000304778 CARMIL3Q8ND23 1372 aa18.74■□□□□ 0.59
LONRF3-201ENST00000304778 GOLGA6L19H0YKK7 550 aa18.74■□□□□ 0.59
LONRF3-201ENST00000304778 PDIA3P30101 505 aaKnown RBP18.74■□□□□ 0.59
LONRF3-201ENST00000304778 SNW1Q13573 536 aaKnown RBP18.74■□□□□ 0.59
LONRF3-201ENST00000304778 TTF1Q15361 905 aaPredicted RBP18.74■□□□□ 0.59
LONRF3-201ENST00000304778 SLC9C2Q5TAH2 1124 aa18.74■□□□□ 0.59
LONRF3-201ENST00000304778 ST7Q9NRC1 585 aa18.74■□□□□ 0.59
LONRF3-201ENST00000304778 GPAA1O43292 621 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 FGAP02671 866 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 SLC5A1P13866 664 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 ADD2P35612 726 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
LONRF3-201ENST00000304778 HAND2P61296 217 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 TPD52L1Q16890 204 aaPredicted RBP18.73■□□□□ 0.59
LONRF3-201ENST00000304778 CHST3Q7LGC8 479 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 USP21Q9UK80 565 aa18.73■□□□□ 0.59
LONRF3-201ENST00000304778 TULP2O00295 520 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 IGHMBP2P38935 993 aaKnown RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 CLEC4GQ6UXB4 293 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 FBXL16Q8N461 479 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 ENGASEQ8NFI3 743 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 TRMT1Q9NXH9 659 aaKnown RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 PAXBP1Q9Y5B6 917 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 KINO60870 393 aaKnown RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 IMMTQ16891 758 aaKnown RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 FAM182BQ5T319 152 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 PAXIP1Q6ZW49 1069 aaPredicted RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 ZNF397Q8NF99 534 aaPredicted RBP18.72■□□□□ 0.59
LONRF3-201ENST00000304778 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
LONRF3-201ENST00000304778 ERFEQ4G0M1 354 aa18.71■□□□□ 0.59
LONRF3-201ENST00000304778 MRFAP1L1Q96HT8 127 aa18.71■□□□□ 0.59
LONRF3-201ENST00000304778 MYH7P12883 1935 aa18.71■□□□□ 0.59
LONRF3-201ENST00000304778 EVCP57679 992 aa18.71■□□□□ 0.59
LONRF3-201ENST00000304778 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
LONRF3-201ENST00000304778 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 BICDL1Q6ZP65 573 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 SPATA5Q8NB90 893 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 ZNF532Q9HCE3 1301 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 ZNF831Q5JPB2 1677 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 ME1P48163 572 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 FSIP1Q8NA03 581 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 CNTNAP4Q9C0A0 1308 aa18.7■□□□□ 0.58
LONRF3-201ENST00000304778 RASGRF1Q13972 1273 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 UBE3CQ15386 1083 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 ANO10Q9NW15 660 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 FDPSP14324 419 aaKnown RBP18.69■□□□□ 0.58
LONRF3-201ENST00000304778 PDE6AP16499 860 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 MYO5AQ9Y4I1 1855 aaKnown RBP18.69■□□□□ 0.58
LONRF3-201ENST00000304778 CHRNDQ07001 517 aa18.69■□□□□ 0.58
LONRF3-201ENST00000304778 LAMB2P55268 1798 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 COL4A1P02462 1669 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 BECN2A8MW95 431 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 BCAMP50895 628 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
LONRF3-201ENST00000304778 ZNF215Q9UL58 517 aaPredicted RBP18.68■□□□□ 0.58
LONRF3-201ENST00000304778 TCRBV5S4A2TA0A5A2 114 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 CERS3Q8IU89 383 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 DHX40Q8IX18 779 aaKnown RBP18.68■□□□□ 0.58
LONRF3-201ENST00000304778 MRPS27Q92552 414 aaKnown RBP18.68■□□□□ 0.58
LONRF3-201ENST00000304778 RTEL1Q9NZ71 1219 aa18.68■□□□□ 0.58
LONRF3-201ENST00000304778 ATRNO75882 1429 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 ZNF213O14771 459 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 FBXO38Q6PIJ6 1188 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
LONRF3-201ENST00000304778 NEMFO60524 1076 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 CEP135Q66GS9 1140 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 FAM53CQ9NYF3 392 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 PCDHA7Q9UN72 937 aa18.67■□□□□ 0.58
LONRF3-201ENST00000304778 ADALQ6DHV7 355 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms