RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MCM6Q14566 821 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 TLDC2A0PJX2 215 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
PCF11-201ENST00000298281 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
PCF11-201ENST00000298281 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
PCF11-201ENST00000298281 RSPH14Q9UHP6 348 aa13.48□□□□□ -0.25
PCF11-201ENST00000298281 GRM8O00222 908 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 RRP36Q96EU6 259 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 CCDC42Q96M95 316 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 SKILP12757 684 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 RNF217Q8TC41 542 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 AFMP43652 599 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 C10orf67Q8IYJ2 551 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ARHGEF11O15085 1522 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 PCK1P35558 622 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ZNF131P52739 623 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 BRDTQ58F21 947 aaPredicted RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 ZBTB41Q5SVQ8 909 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 IFT81Q8WYA0 676 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ANKRD35Q8N283 1001 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 ZCRB1Q8TBF4 217 aaKnown RBP13.47□□□□□ -0.25
PCF11-201ENST00000298281 SAMD15Q9P1V8 674 aa13.47□□□□□ -0.25
PCF11-201ENST00000298281 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
PCF11-201ENST00000298281 RBBP5Q15291 538 aaKnown RBP13.46□□□□□ -0.25
PCF11-201ENST00000298281 MTUS1Q9ULD2 1270 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 UTP14CQ5TAP6 766 aaKnown RBP13.46□□□□□ -0.25
PCF11-201ENST00000298281 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 GBP1P32455 592 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 ZSCAN32Q9NX65 697 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 MX2P20592 715 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
PCF11-201ENST00000298281 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 ZSCAN23Q3MJ62 389 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 FYB2Q5VWT5 728 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 TAOK1Q7L7X3 1001 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 BRAPQ7Z569 592 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 CUL7Q14999 1698 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 SETSIPP0DME0 302 aa13.46□□□□□ -0.26
PCF11-201ENST00000298281 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 HAUS8Q9BT25 410 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 RBM8AQ9Y5S9 174 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 BZW2Q9Y6E2 419 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 VAV2P52735 878 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 ANO6Q4KMQ2 910 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 MORC4Q8TE76 937 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 RSRC1Q96IZ7 334 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 MSH6P52701 1360 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 OCM2P0CE71 109 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 OCMP0CE72 109 aaPredicted RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 IL1RL1Q01638 556 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 RAP1GDS1P52306 607 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 SLC12A2P55011 1212 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 PDZD8Q8NEN9 1154 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 M0QZ92 97 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 SPTLC2O15270 562 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 KRT3P12035 628 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 CCDC94Q9BW85 323 aaPredicted RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 GOLGA6BA6NDN3 693 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 MCM7P33993 719 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
PCF11-201ENST00000298281 SH2D4AQ9H788 454 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 GOLGA6AQ9NYA3 693 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
PCF11-201ENST00000298281 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 ATICP31939 592 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 KRT2P35908 639 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 TTC30AQ86WT1 665 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 CAPZA3Q96KX2 299 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
PCF11-201ENST00000298281 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 NFKBIL1Q9UBC1 381 aaPredicted RBP13.44□□□□□ -0.26
PCF11-201ENST00000298281 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 BAG5Q9UL15 447 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 CCDC62Q6P9F0 684 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 PDCD2Q16342 344 aaPredicted RBP13.44□□□□□ -0.26
PCF11-201ENST00000298281 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
PCF11-201ENST00000298281 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms