RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 PIH1D3Q9NQM4 214 aaKnown RBP7.95□□□□□ -1.14
CD44-204ENST00000279452 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 USP40Q9NVE5 1235 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 MROH7-TTC4A0A0A0MT08 1334 aa7.95□□□□□ -1.14
CD44-204ENST00000279452 CYP7A1P22680 504 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 HUNKP57058 714 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 TCP10Q12799 353 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 TTF1Q15361 905 aaPredicted RBP7.94□□□□□ -1.14
CD44-204ENST00000279452 APOBEC3HQ6NTF7 200 aaKnown RBP7.94□□□□□ -1.14
CD44-204ENST00000279452 CDC42EP5Q6NZY7 148 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 ZSCAN29Q8IWY8 852 aaPredicted RBP7.94□□□□□ -1.14
CD44-204ENST00000279452 MAGEB6Q8N7X4 407 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 NSUN4Q96CB9 384 aaKnown RBP7.94□□□□□ -1.14
CD44-204ENST00000279452 LNPKQ9C0E8 428 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 TMEM39BQ9GZU3 492 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 PAG1Q9NWQ8 432 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 PPP2R3BQ9Y5P8 575 aa7.94□□□□□ -1.14
CD44-204ENST00000279452 MAST2Q6P0Q8 1798 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 ERC2O15083 957 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 BAG3O95817 575 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 MAP4K4O95819 1239 aaPredicted RBP7.93□□□□□ -1.14
CD44-204ENST00000279452 IGHDP01880 384 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 ATP5JP18859 108 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 MX1P20591 662 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 DEFB115Q30KQ5 88 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 SUPT20HL1Q3ZLR7 823 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 CST9Q5W186 159 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 MOB2Q70IA6 237 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 MIGA1Q8NAN2 632 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 OTUD7AQ8TE49 926 aaPredicted RBP7.93□□□□□ -1.14
CD44-204ENST00000279452 EDC3Q96F86 508 aaKnown RBP7.93□□□□□ -1.14
CD44-204ENST00000279452 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.93□□□□□ -1.14
CD44-204ENST00000279452 AATFQ9NY61 560 aaKnown RBP eCLIP7.93□□□□□ -1.14
CD44-204ENST00000279452 ANGEL1Q9UNK9 670 aaKnown RBP7.93□□□□□ -1.14
CD44-204ENST00000279452 FZD1Q9UP38 647 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 TLL2Q9Y6L7 1015 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 GAKO14976 1311 aa7.93□□□□□ -1.14
CD44-204ENST00000279452 ZBTB22O15209 634 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 PPP1R12BO60237 982 aaPredicted RBP7.92□□□□□ -1.14
CD44-204ENST00000279452 ZNF157P51786 506 aaPredicted RBP7.92□□□□□ -1.14
CD44-204ENST00000279452 NFIAQ12857 509 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
CD44-204ENST00000279452 SLC9C2Q5TAH2 1124 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 CYP4F22Q6NT55 531 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 ARMC9Q7Z3E5 817 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 TEX11Q8IYF3 940 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.92□□□□□ -1.14
CD44-204ENST00000279452 KLRG1Q96E93 195 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 HAUS7Q99871 368 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 MRIQ9BWK5 157 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 CNTNAP1P78357 1384 aa7.92□□□□□ -1.14
CD44-204ENST00000279452 GPR75-ASB3A0A0A6YYF3 556 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 RASSF10A6NK89 507 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 UBE2Q2LH0YL09 131 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 GLRX3O76003 335 aaKnown RBP7.91□□□□□ -1.14
CD44-204ENST00000279452 PDE6AP16499 860 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 PLCG2P16885 1265 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 ECE1P42892 770 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 USP5P45974 858 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 RGS3P49796 1198 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 DYNLL1P63167 89 aaKnown RBP7.91□□□□□ -1.14
CD44-204ENST00000279452 FKBP1BP68106 108 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
CD44-204ENST00000279452 SLC4A8Q2Y0W8 1093 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 ZSCAN25Q6NSZ9 544 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 ADGRA1Q86SQ6 560 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 SAPCD2Q86UD0 394 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 CHD1LQ86WJ1 897 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 SMC5Q8IY18 1101 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 SH3RF3Q8TEJ3 882 aaPredicted RBP7.91□□□□□ -1.14
CD44-204ENST00000279452 ZNF384Q8TF68 577 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 HOOK2Q96ED9 719 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 CAPNS2Q96L46 248 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 FSD1Q9BTV5 496 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 TTC41PQ6P2S7 1318 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 ZNF532Q9HCE3 1301 aa7.91□□□□□ -1.14
CD44-204ENST00000279452 PAPPA2Q9BXP8 1791 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 MAGEB6P1A0A0J9YX57 407 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 TRIM6-TRIM34B2RNG4 842 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 IREB2P48200 963 aaKnown RBP7.9□□□□□ -1.14
CD44-204ENST00000279452 VEGFBP49765 207 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 DCAF15Q66K64 600 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 RGMBQ6NW40 437 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 MIGA2Q7L4E1 593 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 FAM83AQ86UY5 434 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 MAPKAPK5Q8IW41 473 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 TGFBRAP1Q8WUH2 860 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 FAM151AQ8WW52 585 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 CSRNP1Q96S65 589 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
CD44-204ENST00000279452 ECM29Q5VYK3 1845 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 SSC5DA1L4H1 1573 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 RPAP1Q9BWH6 1393 aaPredicted RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 WDR33Q9C0J8 1336 aaKnown RBP7.89□□□□□ -1.15
CD44-204ENST00000279452 AOC2O75106 756 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 ENTPD3O75355 529 aa7.89□□□□□ -1.15
CD44-204ENST00000279452 WDHD1O75717 1129 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms