RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
SPG7-201ENST00000268704 ALS2Q96Q42 1657 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 GNL2Q13823 731 aaKnown RBP19.69■□□□□ 0.74
SPG7-201ENST00000268704 KRT40Q6A162 431 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 FAM89AQ96GI7 184 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 EPC1Q9H2F5 836 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 ETF1P62495 437 aaKnown RBP19.69■□□□□ 0.74
SPG7-201ENST00000268704 FANCLQ9NW38 375 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 SPEF2Q9C093 1822 aa19.69■□□□□ 0.74
SPG7-201ENST00000268704 DDX60Q8IY21 1712 aaKnown RBP19.68■□□□□ 0.74
SPG7-201ENST00000268704 METAP2P50579 478 aaKnown RBP eCLIP19.68■□□□□ 0.74
SPG7-201ENST00000268704 FOXP4Q8IVH2 680 aaPredicted RBP19.68■□□□□ 0.74
SPG7-201ENST00000268704 STK11IPQ8N1F8 1099 aa19.68■□□□□ 0.74
SPG7-201ENST00000268704 CHMP4CQ96CF2 233 aa19.68■□□□□ 0.74
SPG7-201ENST00000268704 MYL5Q02045 173 aa19.68■□□□□ 0.74
SPG7-201ENST00000268704 TRIM65Q6PJ69 517 aa19.68■□□□□ 0.74
SPG7-201ENST00000268704 METTL16Q86W50 562 aaKnown RBP19.68■□□□□ 0.74
SPG7-201ENST00000268704 FHOD1Q9Y613 1164 aa19.68■□□□□ 0.74
SPG7-201ENST00000268704 IKBKBO14920 756 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 PDE4BQ07343 736 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 PTPAQ15257 358 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 LONRF3Q496Y0 759 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 TUBE1Q9UJT0 475 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 COL18A1P39060 1754 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 MYO5AQ9Y4I1 1855 aaKnown RBP19.67■□□□□ 0.74
SPG7-201ENST00000268704 B4E1Z4 1266 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 URI1O94763 535 aaPredicted RBP19.67■□□□□ 0.74
SPG7-201ENST00000268704 APPP05067 770 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 MCAMP43121 646 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 HPSEQ9Y251 543 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 NRDCO43847 1150 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 CPDO75976 1380 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.67■□□□□ 0.74
SPG7-201ENST00000268704 INTS13Q9NVM9 706 aa19.67■□□□□ 0.74
SPG7-201ENST00000268704 ANGEL1Q9UNK9 670 aaKnown RBP19.67■□□□□ 0.74
SPG7-201ENST00000268704 ZMYM6O95789 1325 aa19.66■□□□□ 0.74
SPG7-201ENST00000268704 ZFYP08048 801 aaPredicted RBP19.66■□□□□ 0.74
SPG7-201ENST00000268704 BMP6P22004 513 aa19.66■□□□□ 0.74
SPG7-201ENST00000268704 MAP3K14Q99558 947 aa19.66■□□□□ 0.74
SPG7-201ENST00000268704 ECM29Q5VYK3 1845 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 REXO1L1PQ8IX06 675 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 CARD6Q9BX69 1037 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 PKD1L3Q7Z443 1732 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 MYH7P12883 1935 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 RANBP6O60518 1105 aaKnown RBP19.65■□□□□ 0.74
SPG7-201ENST00000268704 SEC31AO94979 1220 aaKnown RBP19.65■□□□□ 0.74
SPG7-201ENST00000268704 KCNJ6P48051 423 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 SLC9C2Q5TAH2 1124 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 APOA5Q6Q788 366 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 PCDHA5Q9Y5H7 936 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 PNMA6AP0CW24 399 aaPredicted RBP19.65■□□□□ 0.74
SPG7-201ENST00000268704 TOP1P11387 765 aaKnown RBP19.65■□□□□ 0.74
SPG7-201ENST00000268704 GRIN1Q05586 938 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 TRDNQ13061 729 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 VSTM4Q8IW00 320 aa19.65■□□□□ 0.74
SPG7-201ENST00000268704 IDH1O75874 414 aaKnown RBP19.64■□□□□ 0.73
SPG7-201ENST00000268704 ZNF827Q17R98 1081 aa19.64■□□□□ 0.73
SPG7-201ENST00000268704 LRRFIP1Q32MZ4 808 aaKnown RBP19.64■□□□□ 0.73
SPG7-201ENST00000268704 SH2B2O14492 632 aaPredicted RBP19.64■□□□□ 0.73
SPG7-201ENST00000268704 UBXN4Q92575 508 aa19.64■□□□□ 0.73
SPG7-201ENST00000268704 ATG3Q9NT62 314 aa19.64■□□□□ 0.73
SPG7-201ENST00000268704 AKAP2Q9Y2D5 859 aa19.64■□□□□ 0.73
SPG7-201ENST00000268704 TMEM94Q12767 1356 aa19.64■□□□□ 0.73
SPG7-201ENST00000268704 RESP18Q5W5W9 173 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 CNNM3Q8NE01 707 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 MNS1Q8NEH6 495 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 TIGD1Q96MW7 591 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 PARP3Q9Y6F1 533 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 PHLPP2Q6ZVD8 1323 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 BMS1Q14692 1282 aaKnown RBP19.63■□□□□ 0.73
SPG7-201ENST00000268704 TMEM139Q8IV31 216 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 TRMT44Q8IYL2 757 aaKnown RBP19.63■□□□□ 0.73
SPG7-201ENST00000268704 PDILTQ8N807 584 aa19.63■□□□□ 0.73
SPG7-201ENST00000268704 VWA3AA6NCI4 1184 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 PLA2G4AP47712 749 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 NFXL1Q6ZNB6 911 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 TICAM2Q86XR7 235 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 PIH1D3Q9NQM4 214 aaKnown RBP19.62■□□□□ 0.73
SPG7-201ENST00000268704 KCNH3Q9ULD8 1083 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 UBN2Q6ZU65 1347 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 PPP6R2O75170 966 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 CDK11BP21127 795 aaKnown RBP19.62■□□□□ 0.73
SPG7-201ENST00000268704 METTL24Q5JXM2 366 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 GRAMD1CQ8IYS0 662 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 WDR24Q96S15 920 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 RIC1Q4ADV7 1423 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 ADKP55263 362 aaKnown RBP19.62■□□□□ 0.73
SPG7-201ENST00000268704 OLFM4Q6UX06 510 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 KRBA2Q6ZNG9 492 aa19.62■□□□□ 0.73
SPG7-201ENST00000268704 PRR29P0C7W0 189 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 ADD2P35612 726 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 IFIT5Q13325 482 aaKnown RBP19.61■□□□□ 0.73
SPG7-201ENST00000268704 CCDC82Q8N4S0 544 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 NOL10Q9BSC4 688 aaKnown RBP19.61■□□□□ 0.73
SPG7-201ENST00000268704 SLC26A6Q9BXS9 759 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 PPP2R2CQ9Y2T4 447 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
SPG7-201ENST00000268704 CBFA2T2O43439 604 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms