RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MICALL1Q8N3F8 863 aa15.05■□□□□ 0
NUP54-201ENST00000264883 DHX58Q96C10 678 aa15.05■□□□□ 0
NUP54-201ENST00000264883 PHKG2P15735 406 aa15.05■□□□□ -0
NUP54-201ENST00000264883 CNNM3Q8NE01 707 aa15.05■□□□□ -0
NUP54-201ENST00000264883 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
NUP54-201ENST00000264883 KIAA1468Q9P260 1216 aa15.05■□□□□ -0
NUP54-201ENST00000264883 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
NUP54-201ENST00000264883 ARHGAP6O43182 974 aa15.04■□□□□ -0
NUP54-201ENST00000264883 KIF1CO43896 1103 aaKnown RBP15.04■□□□□ -0
NUP54-201ENST00000264883 PPFIA4O75335 1185 aa15.04■□□□□ -0
NUP54-201ENST00000264883 ERLIN1O75477 346 aa15.04■□□□□ -0
NUP54-201ENST00000264883 LMOD1P29536 600 aaPredicted RBP15.04■□□□□ -0
NUP54-201ENST00000264883 ATP6V1AP38606 617 aa15.04■□□□□ -0
NUP54-201ENST00000264883 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
NUP54-201ENST00000264883 HSP90B2PQ58FF3 399 aa15.04■□□□□ -0
NUP54-201ENST00000264883 FMR1NBQ8N0W7 255 aaPredicted RBP15.04■□□□□ -0
NUP54-201ENST00000264883 USP28Q96RU2 1077 aa15.04■□□□□ -0
NUP54-201ENST00000264883 PLEKHA4Q9H4M7 779 aa15.04■□□□□ -0
NUP54-201ENST00000264883 TLR7Q9NYK1 1049 aaKnown RBP15.04■□□□□ -0
NUP54-201ENST00000264883 SUFUQ9UMX1 484 aa15.04■□□□□ -0
NUP54-201ENST00000264883 SH3TC1Q8TE82 1336 aa15.04■□□□□ -0
NUP54-201ENST00000264883 USP5P45974 858 aa15.04■□□□□ -0
NUP54-201ENST00000264883 NCAPHQ15003 741 aa15.04■□□□□ -0
NUP54-201ENST00000264883 DNAJC21Q5F1R6 531 aaKnown RBP15.04■□□□□ -0
NUP54-201ENST00000264883 FAM71BQ8TC56 605 aa15.04■□□□□ -0
NUP54-201ENST00000264883 KIFC2Q96AC6 838 aa15.04■□□□□ -0
NUP54-201ENST00000264883 ZSWIM4Q9H7M6 989 aa15.04■□□□□ -0
NUP54-201ENST00000264883 POTEB2H3BUK9 544 aa15.03■□□□□ -0
NUP54-201ENST00000264883 CYP27B1O15528 508 aa15.03■□□□□ -0
NUP54-201ENST00000264883 CHMP4BP1P59074 171 aa15.03■□□□□ -0
NUP54-201ENST00000264883 GOLGA8FQ08AF8 430 aa15.03■□□□□ -0
NUP54-201ENST00000264883 GOLGA8DPQ0D2H9 430 aa15.03■□□□□ -0
NUP54-201ENST00000264883 PROSER3Q2NL68 480 aa15.03■□□□□ -0
NUP54-201ENST00000264883 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
NUP54-201ENST00000264883 MRPS27Q92552 414 aaKnown RBP15.03■□□□□ -0
NUP54-201ENST00000264883 CCDC102AQ96A19 550 aa15.03■□□□□ -0
NUP54-201ENST00000264883 AGXT2Q9BYV1 514 aa15.03■□□□□ -0
NUP54-201ENST00000264883 CBFA2T2O43439 604 aa15.03■□□□□ -0
NUP54-201ENST00000264883 EIF5P55010 431 aaKnown RBP15.03■□□□□ -0
NUP54-201ENST00000264883 SCRN1Q12765 414 aa15.03■□□□□ -0
NUP54-201ENST00000264883 DHX32Q7L7V1 743 aaKnown RBP15.03■□□□□ -0
NUP54-201ENST00000264883 IFNL2Q8IZJ0 200 aa15.03■□□□□ -0
NUP54-201ENST00000264883 NSUN7Q8NE18 718 aaKnown RBP15.03■□□□□ -0
NUP54-201ENST00000264883 FAM107BQ9H098 131 aa15.03■□□□□ -0
NUP54-201ENST00000264883 ANKZF1Q9H8Y5 726 aa15.03■□□□□ -0
NUP54-201ENST00000264883 L1RE1Q9UN81 338 aa15.03■□□□□ -0
NUP54-201ENST00000264883 A0A1W2PQ27 194 aa15.02■□□□□ -0
NUP54-201ENST00000264883 A0A1W2PQ64 194 aa15.02■□□□□ -0
NUP54-201ENST00000264883 A0A1W2PQD8 194 aa15.02■□□□□ -0
NUP54-201ENST00000264883 BIN1O00499 593 aa15.02■□□□□ -0
NUP54-201ENST00000264883 UBASH3AP57075 661 aa15.02■□□□□ -0
NUP54-201ENST00000264883 NLRP12P59046 1061 aa15.02■□□□□ -0
NUP54-201ENST00000264883 SRGAP1Q7Z6B7 1085 aa15.02■□□□□ -0
NUP54-201ENST00000264883 MED4Q9NPJ6 270 aa15.02■□□□□ -0
NUP54-201ENST00000264883 RAB21Q9UL25 225 aa15.02■□□□□ -0
NUP54-201ENST00000264883 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
NUP54-201ENST00000264883 PALLDQ8WX93 1383 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 CCDC196A0A1B0GTZ2 297 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 PHACTR2O75167 634 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 ATP1A3P13637 1013 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 FOSBP53539 338 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 TNNI3KQ59H18 835 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 RIC3Q7Z5B4 369 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 HAUS7Q99871 368 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 DSCC1Q9BVC3 393 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 ABCB6Q9NP58 842 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 FPGT-TNNI3KV9GXZ4 949 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 ZNF609O15014 1411 aa15.02□□□□□ -0.01
NUP54-201ENST00000264883 SHANK3Q9BYB0 1731 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 A0A1B0GVL5 298 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 NEURL1BA8MQ27 555 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 ERLIN2O94905 339 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 SERPINC1P01008 464 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 TOP1P11387 765 aaKnown RBP15.01□□□□□ -0.01
NUP54-201ENST00000264883 MNAT1P51948 309 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 GCKRQ14397 625 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 TMEM139Q8IV31 216 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 CCDC12Q8WUD4 166 aaPredicted RBP15.01□□□□□ -0.01
NUP54-201ENST00000264883 DPF2Q92785 391 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 PNKPQ96T60 521 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 FAM204AQ9H8W3 233 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 HELLSQ9NRZ9 838 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 SALL1Q9NSC2 1324 aa15.01□□□□□ -0.01
NUP54-201ENST00000264883 PTPDC1A2A3K4 754 aa15□□□□□ -0.01
NUP54-201ENST00000264883 CYP21A2P08686 494 aa15□□□□□ -0.01
NUP54-201ENST00000264883 CFAP100Q494V2 611 aa15□□□□□ -0.01
NUP54-201ENST00000264883 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
NUP54-201ENST00000264883 MSANTD4Q8NCY6 345 aa15□□□□□ -0.01
NUP54-201ENST00000264883 ZNF274Q96GC6 653 aaPredicted RBP15□□□□□ -0.01
NUP54-201ENST00000264883 KCNG1Q9UIX4 513 aa15□□□□□ -0.01
NUP54-201ENST00000264883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
NUP54-201ENST00000264883 IKBKBO14920 756 aa15□□□□□ -0.01
NUP54-201ENST00000264883 CUTAO60888 179 aa15□□□□□ -0.01
NUP54-201ENST00000264883 IGKV5-2P06315 115 aa15□□□□□ -0.01
NUP54-201ENST00000264883 NDUFA8P51970 172 aa15□□□□□ -0.01
NUP54-201ENST00000264883 CASP8Q14790 479 aa15□□□□□ -0.01
NUP54-201ENST00000264883 VSTM4Q8IW00 320 aa15□□□□□ -0.01
NUP54-201ENST00000264883 FBXL16Q8N461 479 aa15□□□□□ -0.01
NUP54-201ENST00000264883 DCAF5Q96JK2 942 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms