RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CCP110O43303 1012 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 SLU7O95391 586 aaKnown RBP22.73■■□□□ 1.23
CSPG5-201ENST00000264723 PNOCQ13519 176 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 KRT40Q6A162 431 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 LRRC8AQ8IWT6 810 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 TRMT44Q8IYL2 757 aaKnown RBP22.73■■□□□ 1.23
CSPG5-201ENST00000264723 STAMQ92783 540 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 DSCC1Q9BVC3 393 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 KCNF1Q9H3M0 494 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 PHKA1P46020 1223 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 PDE4BQ07343 736 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 ZNF827Q17R98 1081 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 CCDC144BQ3MJ40 725 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 ZNF622Q969S3 477 aaKnown RBP eCLIP22.73■■□□□ 1.23
CSPG5-201ENST00000264723 INCENPQ9NQS7 918 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 CEP131Q9UPN4 1083 aa22.73■■□□□ 1.23
CSPG5-201ENST00000264723 CRACR2BQ8N4Y2 399 aaPredicted RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 LPIN2Q92539 896 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 PUS7LQ9H0K6 701 aaKnown RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 ANGEL1Q9UNK9 670 aaKnown RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 KRT18P05783 430 aaKnown RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 BCAMP50895 628 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 FANCCQ00597 558 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 ARHGAP29Q52LW3 1261 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 KIAA1468Q9P260 1216 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 CCDC194A0A1B0GVG4 234 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 KAT14Q9H8E8 782 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 ELP1O95163 1332 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
CSPG5-201ENST00000264723 GIGYF2Q6Y7W6 1299 aaKnown RBP22.72■■□□□ 1.23
CSPG5-201ENST00000264723 CASQ1P31415 396 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 CCDC150Q8NCX0 1101 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 DACH1Q9UI36 760 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 USP32Q8NFA0 1604 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 PFKFB1P16118 471 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 KIF4BQ2VIQ3 1234 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 ZMYM1Q5SVZ6 1142 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 GOLPH3LQ9H4A5 285 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 CNNM2Q9H8M5 875 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 KIF2AO00139 706 aaPredicted RBP22.71■■□□□ 1.23
CSPG5-201ENST00000264723 PCCAP05165 728 aaPredicted RBP22.71■■□□□ 1.23
CSPG5-201ENST00000264723 GYG1P46976 350 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 ZFP91Q96JP5 570 aaPredicted RBP22.71■■□□□ 1.23
CSPG5-201ENST00000264723 CABP5Q9NP86 173 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 SEC31BQ9NQW1 1179 aa22.71■■□□□ 1.23
CSPG5-201ENST00000264723 DLC1Q96QB1 1528 aa22.7■■□□□ 1.23
CSPG5-201ENST00000264723 MAGEC2Q9UBF1 373 aaPredicted RBP22.7■■□□□ 1.22
CSPG5-201ENST00000264723 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 BAG3O95817 575 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 HLFQ16534 295 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 SPATA5Q8NB90 893 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 TDRD7Q8NHU6 1098 aaKnown RBP22.7■■□□□ 1.22
CSPG5-201ENST00000264723 LZTFL1Q9NQ48 299 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 ZSCAN12O43309 604 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 SIK1P57059 783 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 PICALMQ13492 652 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 CCDC96Q2M329 555 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.7■■□□□ 1.22
CSPG5-201ENST00000264723 MAP3K15Q6ZN16 1313 aa22.7■■□□□ 1.22
CSPG5-201ENST00000264723 RIMBP2O15034 1052 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 BRAPQ7Z569 592 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 CCDC12Q8WUD4 166 aaPredicted RBP22.69■■□□□ 1.22
CSPG5-201ENST00000264723 CCDC43Q96MW1 224 aaKnown RBP22.69■■□□□ 1.22
CSPG5-201ENST00000264723 AGLP35573 1532 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 POLR2DO15514 142 aaKnown RBP22.69■■□□□ 1.22
CSPG5-201ENST00000264723 ADALQ6DHV7 355 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 ST3GAL1Q11201 340 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 SEC63Q9UGP8 760 aaKnown RBP22.69■■□□□ 1.22
CSPG5-201ENST00000264723 SIGLEC1Q9BZZ2 1709 aa22.69■■□□□ 1.22
CSPG5-201ENST00000264723 GPS2Q13227 327 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 PARP10Q53GL7 1025 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 RCOR1Q9UKL0 485 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 KCNH3Q9ULD8 1083 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 CAGE1Q8TC20 777 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 NBPF14Q5TI25 921 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
CSPG5-201ENST00000264723 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 FBXO18Q8NFZ0 1043 aa22.68■■□□□ 1.22
CSPG5-201ENST00000264723 GTF2F1P35269 517 aaKnown RBP eCLIP22.67■■□□□ 1.22
CSPG5-201ENST00000264723 ERCC6LQ2NKX8 1250 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 DIS3L2Q8IYB7 885 aaKnown RBP22.67■■□□□ 1.22
CSPG5-201ENST00000264723 ZNF274Q96GC6 653 aaPredicted RBP22.67■■□□□ 1.22
CSPG5-201ENST00000264723 MAPK8IP1Q9UQF2 711 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 MYO5BQ9ULV0 1848 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 USP27XA6NNY8 438 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 MYL5Q02045 173 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 PLIN2Q99541 437 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 ZNF287Q9HBT7 754 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 LDHCP07864 332 aa22.67■■□□□ 1.22
CSPG5-201ENST00000264723 KRT222Q8N1A0 295 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
CSPG5-201ENST00000264723 COBLO75128 1261 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 TSPY3P0CV98 308 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 TSPY8P0CW00 308 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 PDE6AP16499 860 aa22.66■■□□□ 1.22
CSPG5-201ENST00000264723 CRKLP46109 303 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms