RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 A0A1B0GUL7 405 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 CPLX1O14810 134 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-201ENST00000262887 SLC39A14Q15043 492 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 HSP90AA4PQ58FG1 418 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 ZSWIM4Q9H7M6 989 aa17.17■□□□□ 0.34
XRCC1-201ENST00000262887 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 BEND6Q5SZJ8 279 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 LTN1O94822 1766 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 PXDNQ92626 1479 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 KARSQ15046 597 aaKnown RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 DHX37Q8IY37 1157 aaKnown RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 MYCBPQ99417 103 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 MAGEA9P43362 315 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 TC2NQ8N9U0 490 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 METTL22Q9BUU2 404 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-201ENST00000262887 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 HPSEQ9Y251 543 aa17.16■□□□□ 0.34
XRCC1-201ENST00000262887 MAST3O60307 1309 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 FBXL16Q8N461 479 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 NCAPGQ9BPX3 1015 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 ANKZF1Q9H8Y5 726 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 BRMS1Q9HCU9 246 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 CUTAO60888 179 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 ERLIN1O75477 346 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 USP5P45974 858 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 SPECC1LQ69YQ0 1117 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
XRCC1-201ENST00000262887 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
XRCC1-201ENST00000262887 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-201ENST00000262887 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-201ENST00000262887 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
XRCC1-201ENST00000262887 CEP112Q8N8E3 955 aa17.14■□□□□ 0.33
XRCC1-201ENST00000262887 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
XRCC1-201ENST00000262887 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
XRCC1-201ENST00000262887 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 METTL16Q86W50 562 aaKnown RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 PRC1O43663 620 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 GUCY2CP25092 1073 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 HAND2P61296 217 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 ANKRD24Q8TF21 1146 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 MKRN1Q9UHC7 482 aaKnown RBP17.13■□□□□ 0.33
XRCC1-201ENST00000262887 HPS5Q9UPZ3 1129 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 PCDHA5Q9Y5H7 936 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
XRCC1-201ENST00000262887 PPP6R2O75170 966 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 PDE4BQ07343 736 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 MSANTD4Q8NCY6 345 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 PNKPQ96T60 521 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
XRCC1-201ENST00000262887 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
XRCC1-201ENST00000262887 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
XRCC1-201ENST00000262887 CCDC175P0C221 793 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 CCDC102BQ68D86 513 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 PACS2Q86VP3 889 aa17.12■□□□□ 0.33
XRCC1-201ENST00000262887 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
XRCC1-201ENST00000262887 M0R2C6 588 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 RNF113AO15541 343 aaKnown RBP17.11■□□□□ 0.33
XRCC1-201ENST00000262887 CDC27P30260 824 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.339e-6■■□□□ 12.8
XRCC1-201ENST00000262887 ABCB6Q9NP58 842 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 CDC23Q9UJX2 597 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
XRCC1-201ENST00000262887 RESP18Q5W5W9 173 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 FOXP4Q8IVH2 680 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-201ENST00000262887 CLIC6Q96NY7 704 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 LZTFL1Q9NQ48 299 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 TUBB4BP68371 445 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
XRCC1-201ENST00000262887 BMP6P22004 513 aa17.1■□□□□ 0.33
XRCC1-201ENST00000262887 TIMM10P62072 90 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms