RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 LMNB1P20700 586 aa6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 SETDB1Q15047 1291 aa6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 MAP1SQ66K74 1059 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
HMGB1P5-201ENST00000255320 ADAM11O75078 769 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 RBL2Q08999 1139 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 SEZ6Q53EL9 994 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 FAM117BQ6P1L5 589 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 REC114Q7Z4M0 266 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 JARID2Q92833 1246 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 NKD1Q969G9 470 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 KLHDC7BQ96G42 594 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 LNPKQ9C0E8 428 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 ZNF408Q9H9D4 720 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
HMGB1P5-201ENST00000255320 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 AMPD1P23109 780 aa6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 ARL4DP49703 201 aa6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 GPBAR1Q8TDU6 330 aa6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
HMGB1P5-201ENST00000255320 STK10O94804 968 aaKnown RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 CYP11A1P05108 521 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 MAOBP27338 520 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 CDK8P49336 464 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 RPL6Q02878 288 aaKnown RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 POU4F3Q15319 338 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 CWF19L2Q2TBE0 894 aaKnown RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 ZNF385CQ66K41 422 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 CCDC81Q6ZN84 652 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 KLHL23Q8NBE8 558 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 KCNB2Q92953 911 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 CORO1BQ9BR76 489 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 ZC3H12CQ9C0D7 883 aaKnown RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 BRMS1Q9HCU9 246 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 KRT82Q9NSB4 513 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 PPT2Q9UMR5 302 aa6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P5-201ENST00000255320 LOC100289279A0A1B0GTE1 492 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 ZNF862O60290 1169 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 WFS1O76024 890 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 NLRP12P59046 1061 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 SUZ12Q15022 739 aaKnown RBP6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 MAP4K3Q8IVH8 894 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 SHDQ96IW2 340 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 HIRIP3Q9BW71 556 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 KCNK4Q9NYG8 393 aa6.67□□□□□ -1.34
HMGB1P5-201ENST00000255320 DDX3YO15523 660 aaKnown RBP6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 BPNT1O95861 308 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 DLGAP3O95886 979 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 ETFBP38117 255 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 REXO1Q8N1G1 1221 aaKnown RBP6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 WDR89Q96FK6 387 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 SRRTQ9BXP5 876 aaKnown RBP6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 USP26Q9BXU7 913 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 ZNRF3Q9ULT6 936 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 MRVI1Q9Y6F6 885 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 SHROOM4Q9ULL8 1493 aa6.66□□□□□ -1.34
HMGB1P5-201ENST00000255320 GFRA2O00451 464 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 CLCQ05315 142 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 WIPI1Q5MNZ9 446 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 DTWD1Q8N5C7 304 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 FAM169BQ8N8A8 192 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 TRIM11Q96F44 468 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 ACSBG1Q96GR2 724 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 PCDHA4Q9UN74 947 aa6.65□□□□□ -1.34
HMGB1P5-201ENST00000255320 GRIN3BO60391 1043 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 ATE1O95260 518 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 LIG1P18858 919 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 MCM4P33991 863 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 CD68P34810 354 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 ZNF165P49910 485 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 SERINC3Q13530 473 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 INPP5AQ14642 412 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 GK5Q6ZS86 529 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 FMR1NBQ8N0W7 255 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 ZNF775Q96BV0 537 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 EHMT1Q9H9B1 1298 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 PCDHB14Q9Y5E9 798 aa6.64□□□□□ -1.35
HMGB1P5-201ENST00000255320 A0A0A0MRY4 1105 aa6.63□□□□□ -1.35
HMGB1P5-201ENST00000255320 DLL1O00548 723 aa6.63□□□□□ -1.35
HMGB1P5-201ENST00000255320 KLF4O43474 513 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms