RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 BTDP43251 543 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 RHBDL3P58872 404 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 FKBP1CQ5VVH2 108 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 RILPL2Q969X0 211 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
VPS25-201ENST00000253794 BAG3O95817 575 aa17.02■□□□□ 0.32
VPS25-201ENST00000253794 CHGBP05060 677 aa17.02■□□□□ 0.32
VPS25-201ENST00000253794 PLCG2P16885 1265 aa17.02■□□□□ 0.32
VPS25-201ENST00000253794 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS25-201ENST00000253794 ZNF784Q8NCA9 323 aaPredicted RBP17.02■□□□□ 0.32
VPS25-201ENST00000253794 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
VPS25-201ENST00000253794 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
VPS25-201ENST00000253794 KIF3CO14782 793 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 MYO1BO43795 1136 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
VPS25-201ENST00000253794 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
VPS25-201ENST00000253794 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
VPS25-201ENST00000253794 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
VPS25-201ENST00000253794 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
VPS25-201ENST00000253794 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
VPS25-201ENST00000253794 NOL10Q9BSC4 688 aaKnown RBP17■□□□□ 0.31
VPS25-201ENST00000253794 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
VPS25-201ENST00000253794 ZNF70Q9UC06 446 aaPredicted RBP17■□□□□ 0.31
VPS25-201ENST00000253794 WDHD1O75717 1129 aaPredicted RBP16.99■□□□□ 0.31
VPS25-201ENST00000253794 CHMLP26374 656 aa16.99■□□□□ 0.31
VPS25-201ENST00000253794 APOBEC3FQ8IUX4 373 aaKnown RBP16.99■□□□□ 0.31
VPS25-201ENST00000253794 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
VPS25-201ENST00000253794 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
VPS25-201ENST00000253794 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
VPS25-201ENST00000253794 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
VPS25-201ENST00000253794 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
VPS25-201ENST00000253794 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
VPS25-201ENST00000253794 RAD50Q92878 1312 aa16.98■□□□□ 0.31
VPS25-201ENST00000253794 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
VPS25-201ENST00000253794 DYNLL1P63167 89 aaKnown RBP16.98■□□□□ 0.31
VPS25-201ENST00000253794 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
VPS25-201ENST00000253794 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
VPS25-201ENST00000253794 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
VPS25-201ENST00000253794 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
VPS25-201ENST00000253794 DIAPH3Q9NSV4 1193 aa16.98■□□□□ 0.31
VPS25-201ENST00000253794 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
VPS25-201ENST00000253794 M0R2C6 588 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 ENTPD3O75355 529 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 MBD4O95243 580 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 TNFAIP1Q13829 316 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
VPS25-201ENST00000253794 LCORLQ8N3X6 602 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
VPS25-201ENST00000253794 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
VPS25-201ENST00000253794 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 MKRN1Q9UHC7 482 aaKnown RBP16.97■□□□□ 0.31
VPS25-201ENST00000253794 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 CNTNAP1P78357 1384 aa16.97■□□□□ 0.31
VPS25-201ENST00000253794 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 CLRN2A0PK11 232 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 GPAA1O43292 621 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 CDC45O75419 566 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 GNAT2P19087 354 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
VPS25-201ENST00000253794 CRNKL1Q9BZJ0 848 aaKnown RBP16.96■□□□□ 0.31
VPS25-201ENST00000253794 ARMT1Q9H993 441 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 FAM198AQ9UFP1 575 aa16.96■□□□□ 0.31
VPS25-201ENST00000253794 ATRNL1Q5VV63 1379 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 NFIAQ12857 509 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 GIMAP6Q6P9H5 292 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
VPS25-201ENST00000253794 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
VPS25-201ENST00000253794 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
VPS25-201ENST00000253794 DDX60LQ5H9U9 1706 aaKnown RBP16.95■□□□□ 0.3
VPS25-201ENST00000253794 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 FLT1P17948 1338 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
VPS25-201ENST00000253794 SGSM2O43147 1006 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 TOMM70O94826 608 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 TNNI2P48788 182 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
VPS25-201ENST00000253794 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
VPS25-201ENST00000253794 CDC37L1Q7L3B6 337 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 FAM151AQ8WW52 585 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
VPS25-201ENST00000253794 FOXP2O15409 715 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 CACNB3P54284 484 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
VPS25-201ENST00000253794 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
VPS25-201ENST00000253794 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
VPS25-201ENST00000253794 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms