RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 METAP2P50579 478 aaKnown RBP eCLIP23.16■■□□□ 1.3
CACTIN-202ENST00000248420 TRMT44Q8IYL2 757 aaKnown RBP23.16■■□□□ 1.3
CACTIN-202ENST00000248420 VWA3AA6NCI4 1184 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 GRIN1Q05586 938 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 CCDC57Q2TAC2 916 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 CCDC82Q8N4S0 544 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 DESI2Q9BSY9 194 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 TUBE1Q9UJT0 475 aa23.16■■□□□ 1.3
CACTIN-202ENST00000248420 VSTM4Q8IW00 320 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 CNNM3Q8NE01 707 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 FAM89AQ96GI7 184 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 CCDC34Q96HJ3 373 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 ZSWIM4Q9H7M6 989 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 B4E1Z4 1266 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 GNG11P61952 73 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 PTPAQ15257 358 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 TOGARAM2Q6ZUX3 1019 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 GRAMD1CQ8IYS0 662 aa23.15■■□□□ 1.3
CACTIN-202ENST00000248420 TADA3O75528 432 aa23.14■■□□□ 1.29
CACTIN-202ENST00000248420 HPSEQ9Y251 543 aa23.14■■□□□ 1.29
CACTIN-202ENST00000248420 PPP2R2CQ9Y2T4 447 aa23.14■■□□□ 1.29
CACTIN-202ENST00000248420 SASH3O75995 380 aa23.14■■□□□ 1.29
CACTIN-202ENST00000248420 IRX2Q9BZI1 471 aaPredicted RBP23.14■■□□□ 1.29
CACTIN-202ENST00000248420 ZRANB2O95218 330 aaKnown RBP eCLIP23.13■■□□□ 1.29
CACTIN-202ENST00000248420 ATP2B1P20020 1258 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 TAF7LQ5H9L4 462 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 TEX35Q5T0J7 233 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 FBXL16Q8N461 479 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 APPBP2Q92624 585 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 PHLPP2Q6ZVD8 1323 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 TRDNQ13061 729 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 KARSQ15046 597 aaKnown RBP23.13■■□□□ 1.29
CACTIN-202ENST00000248420 TMEM139Q8IV31 216 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 NEK11Q8NG66 645 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 KCNH3Q9ULD8 1083 aa23.13■■□□□ 1.29
CACTIN-202ENST00000248420 CCDC66A2RUB6 948 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 MAPK8IP2Q13387 824 aaPredicted RBP23.12■■□□□ 1.29
CACTIN-202ENST00000248420 CHMP4CQ96CF2 233 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 MAP3K14Q99558 947 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 KCNJ6P48051 423 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 GYS2P54840 703 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 FMR1Q06787 632 aaKnown RBP eCLIP23.12■■□□□ 1.29
CACTIN-202ENST00000248420 TAF3Q5VWG9 929 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 NFXL1Q6ZNB6 911 aa23.12■■□□□ 1.29
CACTIN-202ENST00000248420 CMTR1Q8N1G2 835 aaKnown RBP23.12■■□□□ 1.29
CACTIN-202ENST00000248420 ANGEL1Q9UNK9 670 aaKnown RBP23.12■■□□□ 1.29
CACTIN-202ENST00000248420 SLIT3O75094 1523 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 CDK11BP21127 795 aaKnown RBP23.11■■□□□ 1.29
CACTIN-202ENST00000248420 SLC9C2Q5TAH2 1124 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
CACTIN-202ENST00000248420 RANBP6O60518 1105 aaKnown RBP23.11■■□□□ 1.29
CACTIN-202ENST00000248420 IDH1O75874 414 aaKnown RBP23.11■■□□□ 1.29
CACTIN-202ENST00000248420 PRR29P0C7W0 189 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 ST5P78524 1137 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 MTF1Q14872 753 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 CCDC102BQ68D86 513 aa23.11■■□□□ 1.29
CACTIN-202ENST00000248420 ARGLU1Q9NWB6 273 aaPredicted RBP23.11■■□□□ 1.29
CACTIN-202ENST00000248420 CBFA2T2O43439 604 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 MCAMP43121 646 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 RESP18Q5W5W9 173 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 KRBA2Q6ZNG9 492 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 BAG1Q99933 345 aaPredicted RBP23.1■■□□□ 1.29
CACTIN-202ENST00000248420 A0A0U1RQJ8 604 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 CYP2C19P33261 490 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 HNRNPH2P55795 449 aaKnown RBP23.1■■□□□ 1.29
CACTIN-202ENST00000248420 APOA5Q6Q788 366 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 ATRIPQ8WXE1 791 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 KCNJ14Q9UNX9 436 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
CACTIN-202ENST00000248420 ZMYM6O95789 1325 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 GUCY1A2P33402 732 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 LRRFIP1Q32MZ4 808 aaKnown RBP23.09■■□□□ 1.29
CACTIN-202ENST00000248420 SLC26A6Q9BXS9 759 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 CASQ1P31415 396 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 CCDC191Q8NCU4 936 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 TIGD1Q96MW7 591 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 NFE2L3Q9Y4A8 694 aa23.09■■□□□ 1.29
CACTIN-202ENST00000248420 BTBD18B2RXH4 712 aa23.08■■□□□ 1.29
CACTIN-202ENST00000248420 IRX5P78411 483 aaPredicted RBP23.08■■□□□ 1.29
CACTIN-202ENST00000248420 SAMSN1Q9NSI8 373 aaKnown RBP23.08■■□□□ 1.29
CACTIN-202ENST00000248420 CIAO1O76071 339 aa23.08■■□□□ 1.29
CACTIN-202ENST00000248420 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
CACTIN-202ENST00000248420 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.08■■□□□ 1.29
CACTIN-202ENST00000248420 ADAMTS7Q9UKP4 1686 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 EFCAB8A8MWE9 144 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 POLR2DO15514 142 aaKnown RBP23.07■■□□□ 1.28
CACTIN-202ENST00000248420 CCP110O43303 1012 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 PPP6R2O75170 966 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 ZFYP08048 801 aaPredicted RBP23.07■■□□□ 1.28
CACTIN-202ENST00000248420 JMYQ8N9B5 988 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 TMEM51Q9NW97 253 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 SH2B2O14492 632 aaPredicted RBP23.07■■□□□ 1.28
CACTIN-202ENST00000248420 ARHGAP6O43182 974 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 ZSCAN12O43309 604 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 TBC1D8O95759 1140 aa23.07■■□□□ 1.28
CACTIN-202ENST00000248420 TC2NQ8N9U0 490 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms