RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RHBDL3P58872 404 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 DYNLL1P63167 89 aaKnown RBP16.85■□□□□ 0.29
SEC61B-201ENST00000223641 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 ZBED3Q96IU2 234 aaPredicted RBP16.85■□□□□ 0.29
SEC61B-201ENST00000223641 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
SEC61B-201ENST00000223641 AATFQ9NY61 560 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC61B-201ENST00000223641 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
SEC61B-201ENST00000223641 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 DDNO94850 711 aaPredicted RBP16.84■□□□□ 0.29
SEC61B-201ENST00000223641 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
SEC61B-201ENST00000223641 GNAT2P19087 354 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 BTDP43251 543 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 PTH1RQ03431 593 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 USP26Q9BXU7 913 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 GPRC5DQ9NZD1 345 aa16.84■□□□□ 0.29
SEC61B-201ENST00000223641 CNOT7Q9UIV1 285 aaKnown RBP16.84■□□□□ 0.29
SEC61B-201ENST00000223641 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
SEC61B-201ENST00000223641 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
SEC61B-201ENST00000223641 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
SEC61B-201ENST00000223641 PLCG2P16885 1265 aa16.83■□□□□ 0.28
SEC61B-201ENST00000223641 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
SEC61B-201ENST00000223641 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
SEC61B-201ENST00000223641 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
SEC61B-201ENST00000223641 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
SEC61B-201ENST00000223641 PCDHAC2Q9Y5I4 1007 aa16.83■□□□□ 0.28
SEC61B-201ENST00000223641 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 ALX1Q15699 326 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 GIMAP6Q6P9H5 292 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 MICALL2Q8IY33 904 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
SEC61B-201ENST00000223641 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
SEC61B-201ENST00000223641 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
SEC61B-201ENST00000223641 PRKAB2O43741 272 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 CRNKL1Q9BZJ0 848 aaKnown RBP16.81■□□□□ 0.28
SEC61B-201ENST00000223641 ATP8A2Q9NTI2 1148 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 SLC4A4Q9Y6R1 1079 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 SCN4AP35499 1836 aa16.81■□□□□ 0.28
SEC61B-201ENST00000223641 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
SEC61B-201ENST00000223641 H7C1D1 291 aa16.8■□□□□ 0.28
SEC61B-201ENST00000223641 WNT10BO00744 389 aa16.8■□□□□ 0.28
SEC61B-201ENST00000223641 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SEC61B-201ENST00000223641 WDHD1O75717 1129 aaPredicted RBP16.8■□□□□ 0.28
SEC61B-201ENST00000223641 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
SEC61B-201ENST00000223641 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
SEC61B-201ENST00000223641 IFNL3Q8IZI9 196 aa16.8■□□□□ 0.28
SEC61B-201ENST00000223641 EPB41L4AQ9HCS5 686 aaPredicted RBP16.8■□□□□ 0.28
SEC61B-201ENST00000223641 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
SEC61B-201ENST00000223641 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
SEC61B-201ENST00000223641 EGFRP00533 1210 aa16.79■□□□□ 0.28
SEC61B-201ENST00000223641 FGAP02671 866 aa16.79■□□□□ 0.28
SEC61B-201ENST00000223641 SDR42E1Q8WUS8 393 aa16.79■□□□□ 0.28
SEC61B-201ENST00000223641 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
SEC61B-201ENST00000223641 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
SEC61B-201ENST00000223641 NAV1Q8NEY1 1877 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 HSPA4P34932 840 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 EPS15P42566 896 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 FKBP1CQ5VVH2 108 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 KCNB2Q92953 911 aa16.78■□□□□ 0.28
SEC61B-201ENST00000223641 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
SEC61B-201ENST00000223641 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
SEC61B-201ENST00000223641 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
SEC61B-201ENST00000223641 MYH1P12882 1939 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 POTECB2RU33 542 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 RBM25P49756 843 aaKnown RBP16.77■□□□□ 0.28
SEC61B-201ENST00000223641 NBPF9Q3BBW0 867 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 TGFBRAP1Q8WUH2 860 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.28
SEC61B-201ENST00000223641 ADARB2Q9NS39 739 aaKnown RBP16.77■□□□□ 0.28
SEC61B-201ENST00000223641 FLT1P17948 1338 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 HIRAP54198 1017 aaPredicted RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 KIF4BQ2VIQ3 1234 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 TSGA10IPQ3SY00 556 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 TBC1D10BQ4KMP7 808 aaPredicted RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
SEC61B-201ENST00000223641 FAM198AQ9UFP1 575 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
SEC61B-201ENST00000223641 LAMB1P07942 1786 aa16.75■□□□□ 0.27
SEC61B-201ENST00000223641 APPP05067 770 aa16.75■□□□□ 0.27
SEC61B-201ENST00000223641 USP5P45974 858 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms