RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 SMC6Q96SB8 1091 aa20.08■□□□□ 0.8
EXTL3-201ENST00000220562 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.8
EXTL3-201ENST00000220562 TLDC2A0PJX2 215 aa20.08■□□□□ 0.8
EXTL3-201ENST00000220562 CCNT1O60563 726 aaKnown RBP20.08■□□□□ 0.8
EXTL3-201ENST00000220562 EPB41P11171 864 aaKnown RBP20.08■□□□□ 0.8
EXTL3-201ENST00000220562 ATL3Q6DD88 541 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 MAK16Q9BXY0 300 aaKnown RBP20.07■□□□□ 0.8
EXTL3-201ENST00000220562 MTRF1LQ9UGC7 380 aaKnown RBP20.07■□□□□ 0.8
EXTL3-201ENST00000220562 BACH1O14867 736 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 FAM160A1Q05DH4 1040 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 G2E3Q7L622 706 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 RPL13P26373 211 aaKnown RBP20.07■□□□□ 0.8
EXTL3-201ENST00000220562 TUBB4BP68371 445 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 TNNI3KQ59H18 835 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 FPGT-TNNI3KV9GXZ4 949 aa20.07■□□□□ 0.8
EXTL3-201ENST00000220562 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 ATP2A2P16615 1042 aaKnown RBP20.06■□□□□ 0.8
EXTL3-201ENST00000220562 ITGA6P23229 1130 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 VAV2P52735 878 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 EYA3Q99504 573 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 A0A1B0GUL7 405 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 TRAF5O00463 557 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 PDE4DQ08499 809 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
EXTL3-201ENST00000220562 CHMP2AO43633 222 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 CPLX4Q7Z7G2 160 aa20.06■□□□□ 0.8
EXTL3-201ENST00000220562 PSMC4P43686 418 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 PLCD1P51178 756 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 MTUS1Q9ULD2 1270 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 DEXIO95424 95 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 TEX11Q8IYF3 940 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 VPS16Q9H269 839 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 TXNDC16Q9P2K2 825 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 HS1BP3Q53T59 392 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 FAM89AQ96GI7 184 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 CARD14Q9BXL6 1004 aa20.05■□□□□ 0.8
EXTL3-201ENST00000220562 TIMM10P62072 90 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 EIF6P56537 245 aaKnown RBP20.04■□□□□ 0.8
EXTL3-201ENST00000220562 TTC6Q86TZ1 520 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 HDXQ7Z353 690 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 SEC62Q99442 399 aaKnown RBP20.04■□□□□ 0.8
EXTL3-201ENST00000220562 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 FAM169AQ9Y6X4 670 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 TRPM2O94759 1503 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 GCP02774 474 aa20.04■□□□□ 0.8
EXTL3-201ENST00000220562 OTUD7AQ8TE49 926 aaPredicted RBP20.04■□□□□ 0.8
EXTL3-201ENST00000220562 GTF2A1P52655 376 aaPredicted RBP20.03■□□□□ 0.8
EXTL3-201ENST00000220562 CFAP58Q5T655 872 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 ANO1Q5XXA6 986 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 CCDC160A6NGH7 325 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 HARSP12081 509 aaKnown RBP20.03■□□□□ 0.8
EXTL3-201ENST00000220562 CALCOCO2Q13137 446 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 FAM76AQ8TAV0 307 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
EXTL3-201ENST00000220562 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
EXTL3-201ENST00000220562 MAP7D1Q3KQU3 841 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 WDR44Q5JSH3 913 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 XAGE2Q96GT9 111 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 ZNF518AQ6AHZ1 1483 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 CCDC94Q9BW85 323 aaPredicted RBP20.03■□□□□ 0.8
EXTL3-201ENST00000220562 NCKAP5LQ9HCH0 1330 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 GNPATO15228 680 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
EXTL3-201ENST00000220562 RILPL1Q5EBL4 403 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 CNNM4Q6P4Q7 775 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 IP6K1Q92551 441 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 TMEM87BQ96K49 555 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 NCOA5Q9HCD5 579 aaKnown RBP20.02■□□□□ 0.8
EXTL3-201ENST00000220562 SAMD15Q9P1V8 674 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 ATP10BO94823 1461 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 KIFAP3Q92845 792 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
EXTL3-201ENST00000220562 EBAG9O00559 213 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 KRT9P35527 623 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 BIRC3Q13489 604 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 DDX21Q9NR30 783 aaKnown RBP eCLIP20.02■□□□□ 0.8
EXTL3-201ENST00000220562 AGTPBP1Q9UPW5 1226 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 FNBP1Q96RU3 617 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 KCNH3Q9ULD8 1083 aa20.02■□□□□ 0.8
EXTL3-201ENST00000220562 EYA2O00167 538 aa20.02■□□□□ 0.79
EXTL3-201ENST00000220562 CALUO43852 315 aaPredicted RBP20.02■□□□□ 0.79
EXTL3-201ENST00000220562 UFL1O94874 794 aa20.02■□□□□ 0.79
EXTL3-201ENST00000220562 LEO1Q8WVC0 666 aaPredicted RBP20.02■□□□□ 0.79
EXTL3-201ENST00000220562 RBSNQ9H1K0 784 aa20.02■□□□□ 0.79
EXTL3-201ENST00000220562 MAPK8IP1Q9UQF2 711 aa20.02■□□□□ 0.79
EXTL3-201ENST00000220562 TOM1O60784 492 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 TNFAIP3P21580 790 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 PLCD3Q8N3E9 789 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 CCDC26Q8TAB7 109 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 ZNF594Q96JF6 807 aaPredicted RBP20.01■□□□□ 0.79
EXTL3-201ENST00000220562 SYNRGQ9UMZ2 1314 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 CYP26C1Q6V0L0 522 aa20.01■□□□□ 0.79
EXTL3-201ENST00000220562 EVCP57679 992 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms