RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TCP10Q12799 353 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 ATP6V0A2Q9Y487 856 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 PNOCQ13519 176 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 TAB2Q9NYJ8 693 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 PPP2R5CQ13362 524 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 PYM1Q9BRP8 204 aaKnown RBP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 GINS2Q9Y248 185 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 LUC7L2Q9Y383 392 aaKnown RBP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 BACH1O14867 736 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 C6orf163Q5TEZ5 329 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 A1BGP04217 495 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 CFAP58Q5T655 872 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 LRRC27Q9C0I9 530 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 KRT83P78385 493 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 OPA1O60313 960 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 PKP1Q13835 747 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 KLHL7Q8IXQ5 586 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 TMTC2Q8N394 836 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 ABCC1P33527 1531 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 PARP1P09874 1014 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 HSPA2P54652 639 aa15.31■□□□□ 0.04
TGFBR3-201ENST00000212355 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 MTX1Q13505 466 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 RTL9Q8NET4 1388 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 SYCP2Q9BX26 1530 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 HOXC9P31274 260 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 DDB1Q16531 1140 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 LEO1Q8WVC0 666 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 USTQ9Y2C2 406 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 VGLL3A8MV65 326 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 TNNI3KQ59H18 835 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 FPGT-TNNI3KV9GXZ4 949 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 ALDH1L1O75891 902 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 LRMPQ12912 555 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 TTC31Q49AM3 519 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 NCAPH2Q6IBW4 605 aa15.3■□□□□ 0.04
TGFBR3-201ENST00000212355 NBPF11Q86T75 865 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 CLSTN2Q9H4D0 955 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 GNPATO15228 680 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 NAA25Q14CX7 972 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 PARD3Q8TEW0 1356 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 NSRP1Q9H0G5 558 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 PPANQ9NQ55 473 aaKnown RBP15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 USP19O94966 1318 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 FANCCQ00597 558 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 BIRC3Q13489 604 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 MYL5Q02045 173 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
TGFBR3-201ENST00000212355 A0A087WWV3 80 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 MGARPQ8TDB4 240 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 EEF2KMTQ96G04 330 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 PRAG1Q86YV5 1406 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 CUL7Q14999 1698 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 PABPN1LA6NDY0 278 aaKnown RBP15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 ELP1O95163 1332 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 KCNH3Q9ULD8 1083 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 AGTPBP1Q9UPW5 1226 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 TBC1D8BQ0IIM8 1120 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 SV2BQ7L1I2 683 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 FAM76AQ8TAV0 307 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
TGFBR3-201ENST00000212355 IL2RBP14784 551 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 PPM1EQ8WY54 764 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 BICDL2A1A5D9 508 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 GPAA1O43292 621 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
TGFBR3-201ENST00000212355 TEX11Q8IYF3 940 aa15.27■□□□□ 0.03
TGFBR3-201ENST00000212355 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.03
TGFBR3-201ENST00000212355 JAKMIP2Q96AA8 810 aa15.27■□□□□ 0.03
TGFBR3-201ENST00000212355 SLF1Q9BQI6 1058 aa15.27■□□□□ 0.03
TGFBR3-201ENST00000212355 DDX23Q9BUQ8 820 aaKnown RBP15.27■□□□□ 0.03
TGFBR3-201ENST00000212355 UFL1O94874 794 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms