RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 DEFB125Q8N687 156 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.33□□□□□ -1.24
PHGDH-212ENST00000641247 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 IL22RA2Q969J5 263 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 C5orf30Q96GV9 206 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 MS4A10Q96PG2 267 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 GPHA2Q96T91 129 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 HSD17B10Q99714 261 aaKnown RBP7.33□□□□□ -1.24
PHGDH-212ENST00000641247 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 SCRT1Q9BWW7 348 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 FKBP11Q9NYL4 201 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 ZFP30Q9Y2G7 519 aa7.33□□□□□ -1.24
PHGDH-212ENST00000641247 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
PHGDH-212ENST00000641247 KIR2DL5BA0A0G2JN68 375 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 KIR2DL5BA0A0G2JPC4 375 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 DUXBA0A1W2PPF3 345 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 MSGN1A6NI15 193 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 HSBP1L1C9JCN9 74 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 RAB29O14966 203 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 PROP1O75360 226 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 SERPINE2P07093 398 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 CD7P09564 240 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 G0S2P27469 103 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 VAMP2P63027 116 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 CATR1Q13166 79 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 ECSCRQ19T08 205 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 TMEM183BQ1AE95 376 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 ODF3L1Q8IXM7 274 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 SELENOHQ8IZQ5 122 aaKnown RBP7.32□□□□□ -1.24
PHGDH-212ENST00000641247 KIR2DL5AQ8N109 375 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 TCTEX1D1Q8N7M0 179 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 OR51H1Q8NH63 302 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 FAM213BQ8TBF2 198 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 OVOL2Q9BRP0 275 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 ELOVL1Q9BW60 279 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 TNCP24821 2201 aa7.32□□□□□ -1.24
PHGDH-212ENST00000641247 SAA2-SAA4A0A096LPE2 208 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 M0R1X1 148 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 FCN1O00602 326 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 PITX3O75364 302 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 SCAF4O95104 1147 aaKnown RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 HLA-DRB1P01911 266 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 AMBPP02760 352 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 CSN3P07498 182 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 SAA2P0DJI9 122 aaPredicted RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 DUTP33316 252 aaKnown RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 RPL30P62888 115 aaKnown RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 KLF5Q13887 457 aaPredicted RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 MMDQ15546 238 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 RPL39P5Q59GN2 51 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 OR2G3Q8NGZ4 309 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 TMEM170AQ8WVE7 144 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 FRZBQ92765 325 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 FLYWCH2Q96CP2 140 aaKnown RBP7.31□□□□□ -1.24
PHGDH-212ENST00000641247 PYGO2Q9BRQ0 406 aa7.31□□□□□ -1.24
PHGDH-212ENST00000641247 A0A1B0GU03 582 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 MAP1LC3B2A6NCE7 125 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 LINC00473A8K010 186 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF785A8K8V0 405 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 K7EP13 123 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 SCGB1D1O95968 90 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 IFNA5P01569 189 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF137PP52743 207 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF585BQ52M93 769 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 LGALS9CQ6DKI2 356 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 FAM71F2Q6NXP2 309 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF705AQ6ZN79 300 aaPredicted RBP7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ZNF833PQ6ZTB9 187 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 GTSCR1Q86UQ5 136 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 OR9G4Q8NGQ1 327 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ABHD5Q8WTS1 349 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 PINX1Q96BK5 328 aaKnown RBP7.3□□□□□ -1.24
PHGDH-212ENST00000641247 ADTRPQ96IZ2 230 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 OR10C1Q96KK4 312 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 FAM103A1Q9BTL3 118 aaKnown RBP7.3□□□□□ -1.24
PHGDH-212ENST00000641247 MAP1LC3BQ9GZQ8 125 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 SIGLEC8Q9NYZ4 499 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 NAT8Q9UHE5 227 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 NAGKQ9UJ70 344 aa7.3□□□□□ -1.24
PHGDH-212ENST00000641247 LSM5Q9Y4Y9 91 aaKnown RBP7.3□□□□□ -1.24
PHGDH-212ENST00000641247 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 RBFOX2O43251 390 aaKnown RBP eCLIP7.29□□□□□ -1.247e-8■■□□□ 12.4
PHGDH-212ENST00000641247 IGKV1-39P01597 117 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 IGKV1D-39P04432 117 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 TYMSP04818 313 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 CXCL1P09341 107 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 CT45A6P0DMU7 189 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 CT45A5P0DMU8 189 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 CT45A7P0DMV0 189 aa7.29□□□□□ -1.24
PHGDH-212ENST00000641247 IL3RAP26951 378 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms