RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 MT-ND6P03923 174 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 VAMP2P63027 116 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 UBE2BP63146 152 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 AMMECR1LQ6DCA0 310 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 ZNF833PQ6ZTB9 187 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 OR1S1Q8NH92 325 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 MCFD2Q8NI22 146 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 CHCHD5Q9BSY4 110 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 A0A087WTM6 91 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 TRAV24A0A0B4J272 114 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 LOC100506127A0A0U1RQW1 187 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 LINC00854A0A1B0GVQ3 168 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 OR4C45A6NMZ5 311 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 MED6O75586 246 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 GASTP01350 101 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 P0C879 139 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 ORM2P19652 201 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 RND2P52198 227 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 NKX2-5P52952 324 aaPredicted RBP3.14□□□□□ -1.91
GABRA1-220ENST00000638159 VBP1P61758 197 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 TMEM236Q5W0B7 351 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 CEACAM19Q7Z692 300 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 PTX4Q96A99 478 aa3.14□□□□□ -1.91
GABRA1-220ENST00000638159 ADAT3Q96EY9 351 aaPredicted RBP3.14□□□□□ -1.91
GABRA1-220ENST00000638159 TRBV5-5A0A0J9YX44 114 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 PSKH1P11801 424 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 PRKACGP22612 351 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 OR10J1P30954 320 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 RPS11P62280 158 aaKnown RBP eCLIP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 Q6ZRG5 221 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 PGLYRP3Q96LB9 341 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 Q9N2K0 584 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TMEM140Q9NV12 185 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 DSCAML1Q8TD84 2053 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TRBV5-7A0A0A0MS05 114 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 MFSD2BA6NFX1 497 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 G3V3Q6 166 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 ITGB1BP1O14713 200 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 MPDU1O75352 247 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 MLLT11Q13015 90 aaPredicted RBP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 FAM78BQ5VT40 261 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 C6orf201Q7Z4U5 140 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 IQCF2Q8IXL9 164 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 OR51G1Q8NGK1 321 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TERB2Q8NHR7 220 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 UFD1Q92890 307 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 NMES1Q9C002 83 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 FRRS1LQ9P0K9 344 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 HSPB7Q9UBY9 170 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 UBE2D4Q9Y2X8 147 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 A0A087WWC5 75 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TRAV1-2A0A0B4J238 106 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 M0R2T5 61 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 LECT2O14960 151 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 CCNKO75909 580 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 SCGB1D2O95969 90 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 CELP19835 753 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TAGLN2P37802 199 aaKnown RBP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 NKX2-1P43699 371 aaPredicted RBP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 PSMB3P49720 205 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TAS2R31P59538 309 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 TAS2R19P59542 299 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 NCS1P62166 190 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 IFITM3Q01628 133 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 KLF9Q13886 244 aaPredicted RBP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 SPANXN2Q5MJ10 180 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 DGAT2L7PQ6IED9 249 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 ACOT7LQ6ZUV0 252 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 Q8N6K4 173 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 OR1P1Q8NH06 330 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 RNF125Q96EQ8 232 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 C5orf30Q96GV9 206 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 C9orf85Q96MD7 179 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 NEU1Q99519 415 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 PNRC2Q9NPJ4 139 aaKnown RBP3.13□□□□□ -1.91
GABRA1-220ENST00000638159 RAB22AQ9UL26 194 aa3.13□□□□□ -1.91
GABRA1-220ENST00000638159 LOC100130705A0A1B0GUX0 176 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 EFCAB10A6NFE3 127 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 F5H697 171 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 H7C1H1 209 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 NAT1P18440 290 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 BTCP35070 178 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 RPS25P62851 125 aaKnown RBP3.12□□□□□ -1.91
GABRA1-220ENST00000638159 SMAGPQ0VAQ4 97 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 Q0VG73 95 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 TRAM1Q15629 374 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 NDUFA5Q16718 116 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 LGALSLQ3ZCW2 172 aaPredicted RBP3.12□□□□□ -1.91
GABRA1-220ENST00000638159 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 CCDC32Q9BV29 185 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 MED9Q9NWA0 146 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 EHFQ9NZC4 300 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 OR2W1Q9Y3N9 320 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 A0A1W2PQL4 384 aaPredicted RBP3.12□□□□□ -1.91
GABRA1-220ENST00000638159 COX7A2P2O60397 106 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 AZU1P20160 251 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 NFYAP23511 347 aaPredicted RBP3.12□□□□□ -1.91
GABRA1-220ENST00000638159 TAS2R46P59540 309 aa3.12□□□□□ -1.91
GABRA1-220ENST00000638159 TOMM20LQ6UXN7 152 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms