RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NPSP0C0P6 89 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 KIAA0141Q14154 515 aaPredicted RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 RPL39P5Q59GN2 51 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 UTF1Q5T230 341 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 SLC16A13Q7RTY0 426 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF439Q8NDP4 499 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 B9D2Q9BPU9 175 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 GGACTQ9BVM4 153 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 ACTR3CQ9C0K3 210 aaPredicted RBP3.77□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 DPM3Q9P2X0 92 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 NAT8Q9UHE5 227 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 U3KQK5 164 aa3.77□□□□□ -1.81
LINC00550-201ENST00000629293 DNAH3Q8TD57 4116 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 IGHV3-72A0A0B4J1Y9 119 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 M0R1X1 148 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TGOLN2O43493 480 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BKO60814 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 FCGR3BO75015 233 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 MPDU1O75352 247 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BJP06899 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BOP23527 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BBP33778 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CDX1P47902 265 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BDP58876 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BCP62807 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 POU2AF1Q16633 256 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST2H2BEQ16778 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 SPINK9Q5DT21 86 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BHQ93079 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BNQ99877 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HIST1H2BMQ99879 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TMPRSS5Q9H3S3 457 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 GNG12Q9UBI6 72 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 URGCP-MRPS24S4R325 110 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 C15orf61A6NNL5 157 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 NCBP2LA6PVI3 153 aaKnown RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 ODF3BA8MYP8 253 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 C17orf112F2Z3M2 114 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 YIF1AO95070 293 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 PFN1P07737 140 aaKnown RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 PSMB3P49720 205 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 RAB7AP51149 207 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 RPL23P62829 140 aaKnown RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 ANXA2RQ3ZCQ2 193 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 WDR73Q6P4I2 378 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 Q8N2B8 174 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 GATAD1Q8WUU5 269 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 RPEQ96AT9 228 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 FAM210BQ96KR6 192 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 OR5B12Q96R08 314 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 SMIM7Q9BQ49 75 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 MLST8Q9BVC4 326 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 PARLQ9H300 379 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 DOK5Q9P104 306 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 SAA2-SAA4A0A096LPE2 208 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TRGV10A0A0A0MS01 117 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TRAV3A0A0B4J244 114 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 KBTBD11-OT1A0A1B0GTJ5 212 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 SMCO3A2RU48 225 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CYB5BO43169 146 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 SAA2P0DJI9 122 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 NPPCP23582 126 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CD1BP29016 333 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 OPRK1P41145 380 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 REG1BP48304 166 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CDC34P49427 236 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 GNG10P50151 68 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 DLX6P56179 175 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 ACOT6Q3I5F7 207 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM30BQ3MIR4 351 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CT45A1Q5HYN5 189 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 ZFAND6Q6FIF0 208 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 OR11H6Q8NGC7 330 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 OR4P4Q8NGL7 312 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 OR4S2Q8NH73 311 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 CT45A3Q8NHU0 189 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 LINC00476Q8WZB0 136 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 RAB9BQ9NP90 201 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM14BQ9NUH8 114 aa3.76□□□□□ -1.81
LINC00550-201ENST00000629293 FOXA2Q9Y261 457 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-201ENST00000629293 HMGB3O15347 200 aaKnown RBP3.75□□□□□ -1.81
LINC00550-201ENST00000629293 TRGC2P03986 189 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 DEFA4P12838 97 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 THBS3P49746 956 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 ERVK-16P61578 105 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 MINOS1Q5TGZ0 78 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 C16orf82Q7Z2V1 217 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 ZNF709Q8N972 641 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 S1PR3Q99500 378 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 MGST2Q99735 147 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 GGTLC1Q9BX51 225 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 LINC00312Q9Y6C7 94 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 MINOS1-NBL1R4GNA1 71 aa3.75□□□□□ -1.81
LINC00550-201ENST00000629293 RBMXL2O75526 392 aaKnown RBP3.75□□□□□ -1.81
LINC00550-201ENST00000629293 S100A9P06702 114 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms