RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM196Q5HYL7 178 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF562Q6V9R5 426 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 Q6ZR03 302 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF493Q6ZR52 646 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC25A48Q6ZT89 311 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 MIR17HGQ75NE6 70 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 MOGAT3Q86VF5 341 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC37A2Q8TED4 501 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 PPDPFLQ8WWR9 84 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM158Q8WZ71 300 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPL36ALQ969Q0 106 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPEQ96AT9 228 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZC2HC1AQ96GY0 325 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 CITED1Q99966 193 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 FGF23Q9GZV9 251 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RAB1BQ9H0U4 201 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPP21Q9H633 154 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF355PQ9NSJ1 428 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 OCIAD1Q9NX40 245 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 UFC1Q9Y3C8 167 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 MYO9BQ13459 2157 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 AGRNO00468 2067 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 PDE4DIPQ5VU43 2346 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 A0A096LNJ9 63 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM213A2RRL7 107 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 FBLL1A6NHQ2 334 aaKnown RBP3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 J3QT63 122 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 PEX7O00628 323 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZFAND5O76080 213 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 BRI3O95415 125 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 DEFA4P12838 97 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 GATA3P23771 443 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 FCGR2BP31994 310 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 CAMPP49913 170 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 FXYD2P54710 66 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 PPP1CAP62136 330 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 ATP5G2Q06055 141 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 DEFB110Q30KQ9 67 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 C2orf83Q53S99 150 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 CFAP126Q5VTH2 177 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 SEM1Q6ZVN7 128 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 SH2D6Q7Z4S9 175 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF329Q86UD4 541 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 TEX29Q8N6K0 151 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 RAB37Q96AX2 223 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF714Q96N38 554 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 C18orf15Q96N68 181 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 C20orf78Q9BR46 151 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 ANAPC13Q9BS18 74 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 PLEKHA3Q9HB20 300 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 HIF1ANQ9NWT6 349 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 TP73-AS1Q9UF72 201 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 SS18L2Q9UHA2 77 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 RALYQ9UKM9 306 aaKnown RBP3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 TCF19Q9Y242 345 aa3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 FOXA2Q9Y261 457 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P50-201ENST00000605814 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 LOC102723996A0A087X1L8 192 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM30CPA0ZSE6 113 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 LINC01548A6NM66 108 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 LINC00473A8K010 186 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 FABP5P3A8MUU1 101 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 CHEK1O14757 476 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 APOMO95445 188 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 FSTL3O95633 263 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 NCR2O95944 276 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 LTAP01374 205 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC25A5P05141 298 aaKnown RBP3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 B4GALT1P15291 398 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ARL3P36405 182 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 CCL11P51671 97 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 DSCR4P56555 118 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF816Q0VGE8 651 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR1C1Q15619 314 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF542PQ5EBM4 170 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ACP7Q6ZNF0 438 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 MOB3BQ86TA1 216 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR1L4Q8NGR5 311 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR1L8Q8NGR8 309 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 PRSS3P2Q8NHM4 247 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 PATE1Q8WXA2 126 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 NRGNQ92686 78 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ARPC1AQ92747 370 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 IFI27L1Q96BM0 104 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 FMC1Q96HJ9 113 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 CARD19Q96LW7 228 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 LINC00479Q96M42 142 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF488Q96MN9 340 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 PRELID3AQ96N28 172 aa3.23□□□□□ -1.89
HMGB1P50-201ENST00000605814 FAM234AQ9H0X4 552 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms