RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OR2T35Q8NGX2 323 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 GLMPQ8WWB7 406 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 SMAD5-AS1Q9Y6J3 95 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 IGHV3-66A0A0C4DH42 116 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 UBE2L5PA0A1B0GUS4 154 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 A8MZ25 164 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 HYPMO75409 117 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 ORM2P19652 201 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 RPL29P47914 159 aaKnown RBP10.39□□□□□ -0.75
RNF40-212ENST00000602784 Q5BKY6 102 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 DEFB121Q5J5C9 76 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 NEURL2Q9BR09 285 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 FBXL17Q9UF56 701 aa10.39□□□□□ -0.75
RNF40-212ENST00000602784 CD7P09564 240 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 CMC4P56277 68 aaPredicted RBP10.38□□□□□ -0.75
RNF40-212ENST00000602784 CD81P60033 236 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
RNF40-212ENST00000602784 CLINT1Q14677 625 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 OR1B1Q8NGR6 318 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 ATP5SQ99766 215 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 GGTLC1Q9BX51 225 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 RNF24Q9Y225 148 aa10.38□□□□□ -0.75
RNF40-212ENST00000602784 ELOA3CA0A087WX78 387 aaPredicted RBP10.37□□□□□ -0.75
RNF40-212ENST00000602784 FGF7P21781 194 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PRR20EP86478 221 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PRR20CP86479 221 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PRR20DP86480 221 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PRR20BP86481 221 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PRR20AP86496 221 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 OPCMLQ14982 345 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 SIGLEC15Q6ZMC9 328 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PPP1R14BQ96C90 147 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 GPR82Q96P67 336 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 PARD6GQ9BYG4 376 aaPredicted RBP10.37□□□□□ -0.75
RNF40-212ENST00000602784 ARL6Q9H0F7 186 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 C19orf73Q9NVV2 129 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
RNF40-212ENST00000602784 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 DNASE2O00115 360 aaPredicted RBP10.36□□□□□ -0.75
RNF40-212ENST00000602784 IGHV4-30-4P0DP06 118 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 PATE2Q6UY27 113 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 Q6ZRG5 221 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 GBGT1Q8N5D6 347 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
RNF40-212ENST00000602784 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
RNF40-212ENST00000602784 WDR61Q9GZS3 305 aaKnown RBP10.36□□□□□ -0.75
RNF40-212ENST00000602784 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
RNF40-212ENST00000602784 IGKV3-7A0A075B6H7 116 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 G3V3Q6 166 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 H3BRN7 92 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 K7EQG2 157 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 IFNA5P01569 189 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 OR5G3P0C626 314 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 MIC13Q5XKP0 118 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 ARV1Q9H2C2 271 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 SEPSECSQ9HD40 501 aaKnown RBP10.35□□□□□ -0.75
RNF40-212ENST00000602784 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 KCNIP2Q9NS61 270 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 SLC39A9Q9NUM3 307 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 DOK5Q9P104 306 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 PXMP4Q9Y6I8 212 aa10.35□□□□□ -0.75
RNF40-212ENST00000602784 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
RNF40-212ENST00000602784 COX7A2P2O60397 106 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 GALR1P47211 349 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 TFPI2P48307 235 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 B2MP61769 119 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 OR1L4Q8NGR5 311 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 SCGB1C1Q8TD33 95 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 PFDN5Q99471 154 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 TUBA4BQ9H853 241 aa10.34□□□□□ -0.75
RNF40-212ENST00000602784 FXYD6-FXYD2A0A087WZ82 144 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 C17orf112F2Z3M2 114 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 FRMD6-AS1P0C7T7 363 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 RPL7P18124 248 aaKnown RBP10.33□□□□□ -0.76
RNF40-212ENST00000602784 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 LINC00305Q7Z4B0 112 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 WFDC3Q8IUB2 231 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 SCRT1Q9BWW7 348 aa10.33□□□□□ -0.76
RNF40-212ENST00000602784 SMIM3Q9BZL3 60 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms