RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CD300EQ496F6 205 aaPredicted RBP8□□□□□ -1.13
CSMD1-217ENST00000602723 STHQ8IWL8 128 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 JPT2Q9H910 190 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 SP7Q8TDD2 431 aaPredicted RBP8□□□□□ -1.13
CSMD1-217ENST00000602723 LINC00158P58513 81 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 PSG7Q13046 419 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 GREM1O60565 184 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-217ENST00000602723 TRAV1-1A0A0B4J248 108 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 RHOGP84095 191 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 TPTE2P1Q5T6R2 138 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 FDCSPQ8NFU4 85 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 GTF3AQ92664 365 aaKnown RBP7.99□□□□□ -1.13
CSMD1-217ENST00000602723 HIST1H4AP62805 103 aaKnown RBP7.99□□□□□ -1.13
CSMD1-217ENST00000602723 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 IGKV1D-43A0A0B4J1Z2 117 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 TRGV4A0A0C4DH28 118 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 CSRP3P50461 194 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 NPC2P61916 151 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 PRB3Q04118 309 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-217ENST00000602723 LINC00271P0C7V0 271 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 CD5P06127 495 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 MORN2Q502X0 79 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 ACTL10Q5JWF8 245 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 TMEM133Q9H2Q1 129 aa7.99□□□□□ -1.13
CSMD1-217ENST00000602723 SIGLEC15Q6ZMC9 328 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 COLCA1Q6ZS62 124 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 NEU4Q8WWR8 484 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-217ENST00000602723 HIVEP3Q5T1R4 2406 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 TNFRSF6BO95407 300 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 MPZP25189 248 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
CSMD1-217ENST00000602723 ZNF48Q96MX3 618 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-217ENST00000602723 OVOL2Q9BRP0 275 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 GTSF1LQ9H1H1 148 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 NAPSAO96009 420 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 PRCDQ00LT1 54 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 GUSBP1Q15486 140 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 FGF16O43320 207 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 CXCL1P09341 107 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 A0A087X0K7 114 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 A0A1B0GW64 132 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 D6R8Y8 96 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 TDGF1P3P51864 188 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 FBLN5Q9UBX5 448 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 GATD1Q8NB37 220 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 PPIFP30405 207 aaKnown RBP7.98□□□□□ -1.13
CSMD1-217ENST00000602723 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 SLC25A28Q96A46 364 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 TOMM40O96008 361 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 PRTN3P24158 256 aa7.98□□□□□ -1.13
CSMD1-217ENST00000602723 NUP210Q8TEM1 1887 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-217ENST00000602723 BCL6BQ8N143 479 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 SIGLEC12Q96PQ1 595 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 C7orf69Q9H7B7 122 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 A0A087WV48 116 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 H0YIZ8 118 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 NCR2O95944 276 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 DTX2Q86UW9 622 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 CEACAM1P13688 526 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 IGHV1-2P23083 117 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 KLF17Q5JT82 389 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 IMMP1LQ96LU5 166 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 OR9G9P0C7N8 305 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 VGLL1Q99990 258 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 COLCA2A8K830 154 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 PAX4O43316 350 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 SSBP2P81877 361 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 DUSP14O95147 198 aaKnown RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 CCL1P22362 96 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 C17orf100A8MU93 164 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 DUTP33316 252 aaKnown RBP7.97□□□□□ -1.13
CSMD1-217ENST00000602723 DTX1Q86Y01 620 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 EDA2RQ9HAV5 297 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 OCIAD2Q56VL3 154 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 C1orf194Q5T5A4 169 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 ITGB1BP1O14713 200 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 LEPROTO15243 131 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 CCL3L1P16619 93 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 SELENOKQ9Y6D0 94 aa7.97□□□□□ -1.13
CSMD1-217ENST00000602723 IGKV2-40A0A087WW87 121 aaPredicted RBP7.96□□□□□ -1.13
CSMD1-217ENST00000602723 IGKV2D-40P01614 121 aaPredicted RBP7.96□□□□□ -1.13
CSMD1-217ENST00000602723 SRD5A1P18405 259 aa7.96□□□□□ -1.13
CSMD1-217ENST00000602723 FAM27E3Q08E93 113 aa7.96□□□□□ -1.13
CSMD1-217ENST00000602723 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms