RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 K7EPK0 472 aa12.6□□□□□ -0.39
HERC3-214ENST00000601319 IL5P05113 134 aa12.6□□□□□ -0.39
HERC3-214ENST00000601319 SPP1P10451 314 aa12.6□□□□□ -0.39
HERC3-214ENST00000601319 TMEM41BQ5BJD5 291 aa12.6□□□□□ -0.39
HERC3-214ENST00000601319 PSMG4Q5JS54 123 aa12.6□□□□□ -0.39
HERC3-214ENST00000601319 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 CA1P00915 261 aaPredicted RBP12.59□□□□□ -0.39
HERC3-214ENST00000601319 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 S100A7P31151 101 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
HERC3-214ENST00000601319 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 ENKURQ8TC29 256 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 LYSTQ99698 3801 aa12.59□□□□□ -0.39
HERC3-214ENST00000601319 A0A0J9YWU9 116 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 CCNKO75909 580 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 SELENOTP62341 195 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 IFITM3Q01628 133 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 CYP2G1PQ6ZSU1 146 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 PPP1R14BQ96C90 147 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 C2orf50Q96LR7 162 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 GGACTQ9BVM4 153 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 MGAT4CQ9UBM8 478 aa12.58□□□□□ -0.4
HERC3-214ENST00000601319 C5orf51A6NDU8 294 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 SOCS3O14543 225 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 PSMB3P49720 205 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 PLP1P60201 277 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 TMEM182Q6ZP80 229 aaPredicted RBP12.57□□□□□ -0.4
HERC3-214ENST00000601319 OR8I2Q8N0Y5 310 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
HERC3-214ENST00000601319 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
HERC3-214ENST00000601319 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 L7N2F9 121 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
HERC3-214ENST00000601319 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
HERC3-214ENST00000601319 MEOX2P50222 304 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 RRAS2P62070 204 aaPredicted RBP12.56□□□□□ -0.4
HERC3-214ENST00000601319 VAMP2P63027 116 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 IL15RAQ13261 267 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 TEPPQ6URK8 271 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 GPR82Q96P67 336 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 TMEM147Q9BVK8 224 aa12.56□□□□□ -0.4
HERC3-214ENST00000601319 GPN1Q9HCN4 374 aaPredicted RBP12.56□□□□□ -0.4
HERC3-214ENST00000601319 LCE6AA0A183 80 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 ZNF98A6NK75 572 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 ISLRO14498 428 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 PRAF2O60831 178 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 DEDDO75618 318 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 LINC00869P0C866 280 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 HLA-DRB4P13762 266 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 ORM2P19652 201 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 C4BPBP20851 252 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 ID1P41134 155 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 GALR1P47211 349 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 OR1B1Q8NGR6 318 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 RARRES2Q99969 163 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 SLC25A32Q9H2D1 315 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 LSM5Q9Y4Y9 91 aaKnown RBP12.55□□□□□ -0.4
HERC3-214ENST00000601319 HLA-DRB4X5D2U9 266 aa12.55□□□□□ -0.4
HERC3-214ENST00000601319 H3BRN7 92 aa12.54□□□□□ -0.4
HERC3-214ENST00000601319 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
HERC3-214ENST00000601319 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
HERC3-214ENST00000601319 NRARPQ7Z6K4 114 aa12.54□□□□□ -0.4
HERC3-214ENST00000601319 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
HERC3-214ENST00000601319 OR11H2Q8NH07 326 aa12.54□□□□□ -0.4
HERC3-214ENST00000601319 H3BMM0 161 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 HYPMO75409 117 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 CAV2P51636 162 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 DEFA1P59665 94 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 DEFA3P59666 94 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 SHANK2-AS3Q9BTD1 123 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 SCRT1Q9BWW7 348 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
HERC3-214ENST00000601319 SLC25A22Q9H936 323 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 LYRM2Q9NU23 88 aaPredicted RBP12.53□□□□□ -0.4
HERC3-214ENST00000601319 HIGD1AQ9Y241 93 aa12.53□□□□□ -0.4
HERC3-214ENST00000601319 RAP2BP61225 183 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.41
HERC3-214ENST00000601319 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
HERC3-214ENST00000601319 RNF24Q9Y225 148 aa12.52□□□□□ -0.41
HERC3-214ENST00000601319 SACSQ9NZJ4 4579 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 NUPR2A6NF83 97 aa12.51□□□□□ -0.41
HERC3-214ENST00000601319 ZNF705EA8MWA4 302 aaPredicted RBP12.51□□□□□ -0.41
HERC3-214ENST00000601319 AGPAT2O15120 278 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms