RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CMYA5Q8N3K9 4069 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 TRAV5A0A0B4J249 113 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 IGHV3-66A0A0C4DH42 116 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 TMEM213A2RRL7 107 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 SCGB2A1O75556 95 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 ZP3P21754 424 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 SERF2P84101 59 aa17.46■□□□□ 0.39
IRF3-227ENST00000600911 FABP1P07148 127 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 M6PRP20645 277 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 FAM122CQ6P4D5 195 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 Q6ZRG5 221 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 MIR17HGQ75NE6 70 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 REC114Q7Z4M0 266 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 C1QL4Q86Z23 238 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 ZNF680Q8NEM1 530 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 PCNPQ8WW12 178 aaKnown RBP17.45■□□□□ 0.38
IRF3-227ENST00000600911 SCRT1Q9BWW7 348 aa17.45■□□□□ 0.38
IRF3-227ENST00000600911 COX7A2P2O60397 106 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 HYPMO75409 117 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 MYCNOSP40205 109 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 FAM106AQ4KMX7 169 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 TMEM41BQ5BJD5 291 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 IL34Q6ZMJ4 242 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 OR10G4Q8NGN3 311 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 OR10G9Q8NGN4 311 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 OR10G7Q8NGN6 311 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 SLC25A22Q9H936 323 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 DNAJC4Q9NNZ3 241 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 KCNIP2Q9NS61 270 aa17.44■□□□□ 0.38
IRF3-227ENST00000600911 HMGB3O15347 200 aaKnown RBP17.43■□□□□ 0.38
IRF3-227ENST00000600911 C10orf113Q5VZT2 155 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 LINC00305Q7Z4B0 112 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 SLC25A39Q9BZJ4 359 aaPredicted RBP17.43■□□□□ 0.38
IRF3-227ENST00000600911 HIGD1AQ9Y241 93 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 U3KQE9 123 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 A8MWP6 167 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 H3BRN7 92 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 LGALS9O00182 355 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 SULT1A2P50226 295 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 ACOT6Q3I5F7 207 aaPredicted RBP17.43■□□□□ 0.38
IRF3-227ENST00000600911 AKR1C8PQ5T2L2 129 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 FAM78BQ5VT40 261 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 PHYHIPLQ96FC7 376 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 RABAC1Q9UI14 185 aa17.43■□□□□ 0.38
IRF3-227ENST00000600911 CRYBB3P26998 211 aa17.42■□□□□ 0.38
IRF3-227ENST00000600911 RIPPLY3P57055 190 aa17.42■□□□□ 0.38
IRF3-227ENST00000600911 LINC00482Q8N8I6 264 aa17.42■□□□□ 0.38
IRF3-227ENST00000600911 SHISA2Q6UWI4 295 aa17.41■□□□□ 0.38
IRF3-227ENST00000600911 C2orf70A6NJV1 201 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 OR9G4Q8NGQ1 327 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 OR1L4Q8NGR5 311 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 FAM213BQ8TBF2 198 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 GATAD1Q8WUU5 269 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 ZNF503Q96F45 646 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 FAM167A-AS1Q96KT0 104 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 SHANK2-AS3Q9BTD1 123 aa17.4■□□□□ 0.38
IRF3-227ENST00000600911 DAZ1Q9NQZ3 744 aaKnown RBP17.4■□□□□ 0.38
IRF3-227ENST00000600911 IGHV7-4-1A0A0J9YVY3 117 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 PF4P02776 101 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 PXDC1Q5TGL8 231 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 RAB24Q969Q5 203 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 METTL26Q96S19 204 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 SLC25A2Q9BXI2 301 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 FUT9Q9Y231 359 aa17.39■□□□□ 0.38
IRF3-227ENST00000600911 ELOA3CA0A087WX78 387 aaPredicted RBP17.39■□□□□ 0.37
IRF3-227ENST00000600911 ZNF98A6NK75 572 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 SEC14L6B5MCN3 397 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 K7EMT4 169 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 BUB3O43684 328 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 CSN3P07498 182 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 SNRPCP09234 159 aaKnown RBP17.39■□□□□ 0.37
IRF3-227ENST00000600911 NPPCP23582 126 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 PFDN5Q99471 154 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 UFC1Q9Y3C8 167 aa17.39■□□□□ 0.37
IRF3-227ENST00000600911 OVOL1O14753 267 aa17.38■□□□□ 0.37
IRF3-227ENST00000600911 CDC34P49427 236 aaPredicted RBP17.38■□□□□ 0.37
IRF3-227ENST00000600911 OR4F17Q8NGA8 305 aa17.38■□□□□ 0.37
IRF3-227ENST00000600911 C17orf77Q96MU5 243 aa17.38■□□□□ 0.37
IRF3-227ENST00000600911 OR4F4Q96R69 305 aa17.38■□□□□ 0.37
IRF3-227ENST00000600911 SMPXQ9UHP9 88 aa17.38■□□□□ 0.37
IRF3-227ENST00000600911 UMAD1C9J7I0 102 aa17.37■□□□□ 0.37
IRF3-227ENST00000600911 CHEK1O14757 476 aa17.37■□□□□ 0.37
IRF3-227ENST00000600911 MBP02144 154 aa17.37■□□□□ 0.37
IRF3-227ENST00000600911 FOLR2P14207 255 aa17.37■□□□□ 0.37
IRF3-227ENST00000600911 EIF5AL1Q6IS14 154 aaKnown RBP17.37■□□□□ 0.37
IRF3-227ENST00000600911 A0A1B0GV50 99 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 MRPS12O15235 138 aaKnown RBP17.36■□□□□ 0.37
IRF3-227ENST00000600911 C8orf88P0DMB2 117 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 CBLN1P23435 193 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 FGF8P55075 233 aaPredicted RBP17.36■□□□□ 0.37
IRF3-227ENST00000600911 RHOBP62745 196 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 LCN15Q6UWW0 184 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 RHPN1-AS1Q9BWJ2 59 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 MLXQ9UH92 298 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 PYYP10082 97 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 RNF2Q99496 336 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 SMAD5-AS1Q9Y6J3 95 aa17.36■□□□□ 0.37
IRF3-227ENST00000600911 A0A1W2PPV4 95 aa17.35■□□□□ 0.37
IRF3-227ENST00000600911 C16orf54Q6UWD8 224 aa17.35■□□□□ 0.37
IRF3-227ENST00000600911 GLMPQ8WWB7 406 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms