RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PHYHIPLQ96FC7 376 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 VSIG2Q96IQ7 327 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TSC22D3Q99576 134 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 BCL7BQ9BQE9 202 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TM2D3Q9BRN9 247 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF2Q9BSG1 426 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 COMMD5Q9GZQ3 224 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 FXYD6Q9H0Q3 95 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 IFT46Q9NQC8 304 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZC4H2Q9NQZ6 224 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 NDUFA4L2Q9NRX3 87 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 EHFQ9NZC4 300 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RABL2AQ9UBK7 228 aaPredicted RBP2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 RABL2BQ9UNT1 228 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 U3KQK5 164 aa2.51□□□□□ -2.01
CKS1BP3-201ENST00000600888 TENM2Q9NT68 2774 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRAV3A0A0B4J244 114 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRAV25A0A0B4J276 109 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TEX50A0A1B0GTY4 177 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 MEIS3P1A6NDR6 274 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 C2orf70A6NJV1 201 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 INS-IGF2F8WCM5 200 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 CYB5BO43169 146 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 HPGDSO60760 199 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 B3GALNT1O75752 331 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SNAPC5O75971 98 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR2J3O76001 311 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 S1PR2O95136 353 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 PMP2P02689 132 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 PRH1P02810 166 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 CD74P04233 296 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SERPINE2P07093 398 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRAPPC2P0DI81 140 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRAPPC2BP0DI82 140 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 C8orf88P0DMB2 117 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 APELAP0DMC3 54 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 CT45A10P0DMU9 189 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 RPA2P15927 270 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 S100GP29377 79 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 HRH1P35367 487 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SYNJ2BPP57105 145 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 FXYD4P59646 89 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 DEFB114Q30KQ6 69 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR2B11Q5JQS5 317 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 AADACL3Q5VUY0 350 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 GPR107Q5VW38 600 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 LINC00322Q6ZN03 302 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SSX9Q7RTT3 188 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM17Q86X19 198 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SBSPONQ8IVN8 264 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SGPP2Q8IWX5 399 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SLC38A6Q8IZM9 456 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 GDPD1Q8N9F7 314 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR1L8Q8NGR8 309 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR5B3Q8NH48 314 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR51H1Q8NH63 302 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 ZNF502Q8TBZ5 544 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 LSM10Q969L4 123 aaKnown RBP2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 MARC2Q969Z3 335 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 EEF1AKMT3Q96AZ1 226 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 SEC22AQ96IW7 307 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM56Q96MV1 263 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 MRPS26Q9BYN8 205 aaKnown RBP2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 HRASLSQ9HDD0 168 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM14BQ9NUH8 114 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 FKBP11Q9NYL4 201 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 MTFP1Q9UDX5 166 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 PRNDQ9UKY0 176 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 F11RQ9Y624 299 aaKnown RBP2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 PCLOQ9Y6V0 5065 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 RYR3Q15413 4870 aa2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM213A2RRL7 107 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 IZUMO1RA6ND01 250 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 GABARAPH6UMI1 98 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 K7EMT4 169 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TGOLN2O43493 480 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 ATG12O94817 140 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 KRASP01116 189 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGKV1-39P01597 117 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 HLA-AP01891 365 aaKnown RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 IGKV1D-39P04432 117 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 OR13C7P0DN81 318 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 DEFA4P12838 97 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 CBLN1P23435 193 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 LPAR6P43657 344 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMBIM6P55061 237 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TSPAN5P62079 268 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 DEFA5Q01523 94 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 WT1-ASQ06250 92 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 SURF2Q15527 256 aaPredicted RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 RNASE10Q5GAN6 216 aaKnown RBP2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 PVRIGQ6DKI7 326 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 SNX29P2Q8IUI4 249 aa2.49□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM229BQ8NBD8 167 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms