RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 S100A7P31151 101 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 P2RY1P47900 373 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 DLK1P80370 383 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 CYCSP99999 105 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 ZNF90Q03938 601 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 ACOT7LQ6ZUV0 252 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 TMEM144Q7Z5S9 345 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 PBDC1Q9BVG4 233 aa12.91□□□□□ -0.34
SHKBP1-203ENST00000594298 PMS2P5A8MQ11 134 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 SSNA1O43805 119 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 RLN2P04090 185 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 TFPI2P48307 235 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 S100A10P60903 97 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 NPVFQ9HCQ7 196 aa12.9□□□□□ -0.34
SHKBP1-203ENST00000594298 GOSR2O14653 212 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 PTTG1O95997 202 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 CAV2P51636 162 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 LYZP61626 148 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 IL15RAQ13261 267 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 OR2F1Q13607 317 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 RPP25LQ8N5L8 163 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
SHKBP1-203ENST00000594298 FRAS1Q86XX4 4008 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 BUB3O43684 328 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 DEDDO75618 318 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 RAB32Q13637 225 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 GATAD1Q8WUU5 269 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 PPP1R14BQ96C90 147 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 NMES1Q9C002 83 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
SHKBP1-203ENST00000594298 SELENOTP62341 195 aa12.87□□□□□ -0.35
SHKBP1-203ENST00000594298 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
SHKBP1-203ENST00000594298 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
SHKBP1-203ENST00000594298 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
SHKBP1-203ENST00000594298 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
SHKBP1-203ENST00000594298 CCNKO75909 580 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 SIX6O95475 246 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 STX12Q86Y82 276 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 KRTAP17-1Q9BYP8 105 aa12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-203ENST00000594298 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 SULT1A1P50225 295 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 HBG1P69891 147 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 HBG2P69892 147 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 RARRES2Q99969 163 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 MFFQ9GZY8 342 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
SHKBP1-203ENST00000594298 E5RGE8 158 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 K7EQG2 157 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 ORM2P19652 201 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 S100A11P31949 105 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 SLC38A11Q08AI6 406 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 RAB31Q13636 194 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 ZNF124Q15973 351 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
SHKBP1-203ENST00000594298 HERC2O95714 4834 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 CST7O76096 145 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 ARL16Q0P5N6 197 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 ATP6V1FQ16864 119 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 C11orf45Q8TAV5 145 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 SLC25A31Q9H0C2 315 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 RNF24Q9Y225 148 aa12.83□□□□□ -0.36
SHKBP1-203ENST00000594298 PET100P0DJ07 73 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 DEFB131AP59861 70 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 RAP2BP61225 183 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 OR8I2Q8N0Y5 310 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 OR11H2Q8NH07 326 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 DCANP1Q8TF63 244 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 GPR82Q96P67 336 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 UQCC1Q9NVA1 299 aa12.82□□□□□ -0.36
SHKBP1-203ENST00000594298 HYPMO75409 117 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 LINC00869P0C866 280 aa12.81□□□□□ -0.36
SHKBP1-203ENST00000594298 PLP1P60201 277 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms