RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 COLCA2A8K830 154 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 GGTLC3B5MD39 225 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 TSPAN4O14817 238 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 HYPMO75409 117 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 NDUFB8O95169 186 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 FABP1P07148 127 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 PSG1P11464 419 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 GP9P14770 177 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 MFAP4P55083 255 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 YPEL3P61236 119 aaPredicted RBP7.34□□□□□ -1.23
VPS25-205ENST00000590339 RPL23P62829 140 aaKnown RBP7.34□□□□□ -1.23
VPS25-205ENST00000590339 UBE2L3P68036 154 aaKnown RBP7.34□□□□□ -1.23
VPS25-205ENST00000590339 FOXL1Q12952 345 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 CST9LP1Q5W188 147 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 C16orf82Q7Z2V1 217 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 OR51G1Q8NGK1 321 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 VN1R17PQ8TDU5 208 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 ZNF414Q96IQ9 312 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 UHRF2Q96PU4 802 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 SSX3Q99909 188 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 THYN1Q9P016 225 aa7.34□□□□□ -1.23
VPS25-205ENST00000590339 WI2-2373I1.2A0A1W2PRP0 233 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 H3BRN7 92 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 H3BUX3 64 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 OR2J3O76001 311 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 OR2C1O95371 312 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
VPS25-205ENST00000590339 FOLR2P14207 255 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 KIAA0141Q14154 515 aaPredicted RBP7.33□□□□□ -1.24
VPS25-205ENST00000590339 ECSCRQ19T08 205 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 AKIRIN2Q53H80 203 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 UNQ5815/PRO19632Q6UWF5 114 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 Q6YL49 198 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 C9orf139Q6ZV77 190 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 LINC00305Q7Z4B0 112 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 STXBP6Q8NFX7 210 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 OR1B1Q8NGR6 318 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 HIST1H2BAQ96A08 127 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 TXN2Q99757 166 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 PAXXQ9BUH6 204 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 TMEM242Q9NWH2 141 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 C21orf62Q9NYP8 219 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 MRPL27Q9P0M9 148 aaKnown RBP7.33□□□□□ -1.24
VPS25-205ENST00000590339 TMEM14CQ9P0S9 112 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 ZNF580Q9UK33 172 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 HIGD1AQ9Y241 93 aa7.33□□□□□ -1.24
VPS25-205ENST00000590339 TRBV20OR9-2A0A075B6H5 130 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 CXorf65A6NEN9 183 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 FAM181BA6NEQ2 426 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 SH2D7A6NKC9 451 aaPredicted RBP7.32□□□□□ -1.24
VPS25-205ENST00000590339 LINC01548A6NM66 108 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 C9JCJ5 164 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 M0QZK8 103 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 NDUFB4O95168 129 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 BRI3O95415 125 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 IGHG2P01859 326 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 IGF1P05019 195 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 CRYBA1P05813 215 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 OR10J4P0C629 311 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 PYYP10082 97 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 ORM2P19652 201 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 MYCNOSP40205 109 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 LYZP61626 148 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 ZNF491Q8N8L2 437 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 OR5T1Q8NG75 326 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 ZNF502Q8TBZ5 544 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 C2CD4CQ8TF44 421 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 ATP6V0BQ99437 205 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 TCEAL7Q9BRU2 100 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 SHANK2-AS3Q9BTD1 123 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 DERL1Q9BUN8 251 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 CTDSP1Q9GZU7 261 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 OR51M1Q9H341 326 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 FBXL7Q9UJT9 491 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 PITPNC1Q9UKF7 332 aa7.32□□□□□ -1.24
VPS25-205ENST00000590339 TRAV41A0A0B4J266 112 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 G3V318 75 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 CLDN34H7C241 214 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 GNG7O60262 68 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 MT-ND4LP03901 98 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 RD3LP0DJH9 198 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 ADMP35318 185 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 RHOGP84095 191 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 ADIRFQ15847 76 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 RNF212Q495C1 297 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 TMEM190Q8WZ59 177 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 RNF125Q96EQ8 232 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 SLC25A39Q9BZJ4 359 aaPredicted RBP7.31□□□□□ -1.24
VPS25-205ENST00000590339 PRELID1Q9Y255 219 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 LY96Q9Y6Y9 160 aa7.31□□□□□ -1.24
VPS25-205ENST00000590339 H3BUA1 57 aa7.3□□□□□ -1.24
VPS25-205ENST00000590339 MRPS12O15235 138 aaKnown RBP7.3□□□□□ -1.24
VPS25-205ENST00000590339 SCGB2A1O75556 95 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms