RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 GPR132Q9UNW8 380 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
CLPTM1-208ENST00000588274 ID1P41134 155 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 LYZP61626 148 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 CTF1Q16619 201 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 OR11H7Q8NGC8 314 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 DTD1Q8TEA8 209 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 NAA50Q9GZZ1 169 aaKnown RBP9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 SLC25A32Q9H2D1 315 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 RBKSQ9H477 322 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 U3KQ87 197 aa9.63□□□□□ -0.87
CLPTM1-208ENST00000588274 A0A087WXM4 84 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 TRAV8-2A0A0B4J237 113 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 ZNF705GA8MUZ8 300 aaPredicted RBP9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 M0R2Z0 102 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 TSPOP30536 169 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 LGI3Q8N145 548 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 OR4C16Q8NGL9 310 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 C7orf50Q9BRJ6 194 aaKnown RBP9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
CLPTM1-208ENST00000588274 GABARAPH6UMI1 98 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 GABARAPO95166 117 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 TNFAIP8O95379 198 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 AZU1P20160 251 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 EBLN2Q6P2I7 272 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 NOXA1Q86UR1 476 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 BAP18Q8IXM2 172 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 RNF141Q8WVD5 230 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 TRGV9Q99603 122 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 C14orf166Q9Y224 244 aaKnown RBP9.61□□□□□ -0.87
CLPTM1-208ENST00000588274 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 A0A0B4J2A0 478 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 SSBP1Q04837 148 aaKnown RBP9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 OR2F1Q13607 317 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 FCN2Q15485 313 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 TMEM182Q6ZP80 229 aaPredicted RBP9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 SPATA12Q7Z6I5 190 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 OR8I2Q8N0Y5 310 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 SMIM4Q8WVI0 70 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 CACFD1Q9UGQ2 172 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 SHPKQ9UHJ6 478 aa9.6□□□□□ -0.87
CLPTM1-208ENST00000588274 PITX3O75364 302 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 INSP01308 110 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 ZNF182P17025 639 aaPredicted RBP9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 MEOX2P50222 304 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 CCR6P51684 374 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 IGFL4Q6B9Z1 124 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 C16orf92Q96LL3 132 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 PFDN2Q9UHV9 154 aa9.59□□□□□ -0.87
CLPTM1-208ENST00000588274 ZNF98A6NK75 572 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 SNRPGP15A8MWD9 76 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 NUDT3O95989 172 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 ATP5IP56385 69 aaPredicted RBP9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 MZT2AQ6P582 158 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 RNF182Q8N6D2 247 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 OR51S1Q8NGJ8 323 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 SLC35E1Q96K37 410 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 VCX3AQ9NNX9 186 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
CLPTM1-208ENST00000588274 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 F5H768 121 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 ATP5G1P05496 136 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 ATP5G3P48201 142 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 C15orf40Q8WUR7 153 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 AP3S1Q92572 193 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 TMEM208Q9BTX3 173 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 RSG1Q9BU20 258 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 Q9H3A6 140 aa9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
CLPTM1-208ENST00000588274 DISC1C4P0D8 188 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 AKAIN1P0CW23 69 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 BTF3P20290 206 aaKnown RBP9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 GATA2P23769 480 aaPredicted RBP9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 GALR1P47211 349 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 MRPS10P82664 201 aaKnown RBP9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 SSX7Q7RTT5 188 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms