RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CACNA1DQ01668 2161 aa10.72□□□□□ -0.69
RNF43-208ENST00000584437 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 SH2D1AO60880 128 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 CEP290O15078 2479 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 PSPNO60542 156 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 IGHV2-70P01814 119 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 COLCA1Q6ZS62 124 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 STHQ8IWL8 128 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 POLR2AP24928 1970 aaKnown RBP10.71□□□□□ -0.69
RNF43-208ENST00000584437 COL11A2P13942 1736 aaPredicted RBP10.71□□□□□ -0.69
RNF43-208ENST00000584437 IGHV1-46P01743 117 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 FAM168AQ92567 244 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
RNF43-208ENST00000584437 GREB1LQ9C091 1923 aaPredicted RBP10.71□□□□□ -0.7
RNF43-208ENST00000584437 LINC00158P58513 81 aa10.71□□□□□ -0.7
RNF43-208ENST00000584437 C10orf55Q5SWW7 151 aa10.71□□□□□ -0.7
RNF43-208ENST00000584437 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.7
RNF43-208ENST00000584437 C9orf139Q6ZV77 190 aa10.71□□□□□ -0.7
RNF43-208ENST00000584437 TMEM158Q8WZ71 300 aa10.71□□□□□ -0.7
RNF43-208ENST00000584437 IGHV3-64A0A075B6Q5 118 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 CD33P20138 364 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 RASL10AQ92737 203 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 C9JQL5 133 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 TEX43Q6ZNM6 134 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 BMPERQ8N8U9 685 aa10.7□□□□□ -0.7
RNF43-208ENST00000584437 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 GGNQ86UU5 652 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 ASCL4Q6XD76 172 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 LINC00477Q96M19 166 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 C10orf91Q5T1B1 145 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 ZNF329Q86UD4 541 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 RNASE6Q93091 150 aaKnown RBP10.69□□□□□ -0.7
RNF43-208ENST00000584437 RALGAPA1Q6GYQ0 2036 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 TRAV3A0A0B4J244 114 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 ZNF492Q9P255 531 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 FREM3P0C091 2139 aa10.69□□□□□ -0.7
RNF43-208ENST00000584437 IGHV2-26A0A0B4J1V2 119 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 A0A0U1RRA0 63 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 PRSS22Q9GZN4 317 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 TRGV4A0A0C4DH28 118 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 Q6P435 159 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 HIST1H4AP62805 103 aaKnown RBP10.68□□□□□ -0.7
RNF43-208ENST00000584437 GAGE1Q13065 139 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 CT83Q5H943 113 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 Q86TA4 180 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 LINC00473A8K010 186 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 MLNRO43193 412 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 MAJINQ3KP22 176 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 IGHV2-5P01817 119 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 IGHV1-8P0DP01 117 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 C18orf32Q8TCD1 76 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 RTTNQ86VV8 2226 aa10.68□□□□□ -0.7
RNF43-208ENST00000584437 A0A0G2JRQ6 117 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 CD24P25063 80 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 GATD1Q8NB37 220 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 CHD5Q8TDI0 1954 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 H0YJW9 148 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 MMP23AO75900 390 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 CD177Q8N6Q3 437 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 DNAJC30Q96LL9 226 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 IGHV1-3A0A0C4DH29 117 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 RPL15P61313 204 aaKnown RBP10.67□□□□□ -0.7
RNF43-208ENST00000584437 C15orf32Q32M92 178 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
RNF43-208ENST00000584437 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 WNT2P09544 360 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 CDKN1AP38936 164 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 PDE6HQ13956 83 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 RNASE2P10153 161 aaKnown RBP10.66□□□□□ -0.7
RNF43-208ENST00000584437 FXYD7P58549 80 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 Q6ZRM9 215 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 AMN1Q8IY45 258 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 JPT2Q9H910 190 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 SPRR3Q9UBC9 169 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 NYNRINQ9P2P1 1898 aaKnown RBP10.66□□□□□ -0.7
RNF43-208ENST00000584437 TMEM200BQ69YZ2 307 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 A0A0G2JMZ2 1700 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 LRRC37A2A6NM11 1700 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 C9orf118A6NHY6 69 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 YPEL3P61236 119 aaPredicted RBP10.66□□□□□ -0.7
RNF43-208ENST00000584437 FOXL2NBQ6ZUU3 175 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 SELENOKQ9Y6D0 94 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 PSME4Q14997 1843 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 C9JAW5 83 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 PAX4O43316 350 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 THBDP07204 575 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms