RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TMEM14EP	Q6UXP3	125 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ACOT7L	Q6ZUV0	252 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	OR8I2	Q8N0Y5	310 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PPP1R14B	Q96C90	147 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	GGACT	Q9BVM4	153 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SACS	Q9NZJ4	4579 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	KNCN	A6PVL3	124 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ZNF705E	A8MWA4	302 aa	Predicted RBP	9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708		H3BMM0	161 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708		H3BP45	60 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708		K7EPK0	472 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SSSCA1	O60232	199 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	GIG44	P09565	113 aa	Predicted RBP	9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	HLA-DRB4	P13762	266 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	GALR1	P47211	349 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	OR2F1	Q13607	317 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ZNF846	Q147U1	533 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	OR10P1	Q8NGE3	313 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	OR1B1	Q8NGR6	318 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ZNF431	Q8TF32	576 aa	Predicted RBP	9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	HRH4	Q9H3N8	390 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	NPVF	Q9HCQ7	196 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	HLA-DRB4	X5D2U9	266 aa		9.18	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	LYST	Q99698	3801 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PMS2P5	A8MQ11	134 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SOCS3	O14543	225 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PAX9	P55771	341 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PLP1	P60201	277 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	EWSR1	Q01844	656 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PXDC1	Q5TGL8	231 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	MZT2B	Q6NZ67	158 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	FOXI2	Q6ZQN5	318 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	CYP2G1P	Q6ZSU1	146 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	CSNK1G2-AS1	Q8NCQ2	148 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	C11orf45	Q8TAV5	145 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TMEM147	Q9BVK8	224 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	NUDT15	Q9NV35	164 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	MGAT4C	Q9UBM8	478 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	AGRN	O00468	2067 aa		9.17	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ZNF98	A6NK75	572 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	IL5	P05113	134 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TCTA	P57738	103 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ASAH1	Q13510	395 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PMS2P11	Q13670	270 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708		Q8NAQ8	132 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PHLDA1	Q8WV24	401 aa	Predicted RBP	9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SAV1	Q9H4B6	383 aa	Predicted RBP	9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	GSKIP	Q9P0R6	139 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TBC1D24	Q9ULP9	559 aa		9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	RCL1	Q9Y2P8	373 aa	Known RBP	9.16	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	DNAH1	Q9P2D7	4330 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	FAM240B	A0A1B0GVZ2	78 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SMCO3	A2RU48	225 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	HYPM	O75409	117 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	DEDD	O75618	318 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SCGB1D2	O95969	90 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	MBP	P02686	304 aa	Predicted RBP	9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	H2AFB2	P0C5Z0	115 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	METTL15P1	P0C7V9	234 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ORM2	P19652	201 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	C4BPB	P20851	252 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	RAP2B	P61225	183 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TEPP	Q6URK8	271 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	C12orf45	Q8N5I9	185 aa	Predicted RBP	9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	WDR12	Q9GZL7	423 aa	Known RBP	9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	RPRM	Q9NS64	109 aa		9.15	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TRAV6	A0A075B6T7	132 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	C7orf66	A4D0T2	115 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	C11orf94	C9JXX5	98 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		L7N2F9	121 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	RPL7	P18124	248 aa	Known RBP	9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	PVALB	P20472	110 aa	Predicted RBP	9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	VAMP2	P63027	116 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	EBLN2	Q6P2I7	272 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	ZNF546	Q86UE3	836 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	LINC00476	Q8WZB0	136 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	C2orf50	Q96LR7	162 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	LINC00052	Q96N35	136 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	NEU1	Q99519	415 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	SHANK2-AS3	Q9BTD1	123 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	SLC25A32	Q9H2D1	315 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	PTTG2	Q9NZH5	202 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	HIGD1A	Q9Y241	93 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		X6R8D5	127 aa		9.14	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	IGHV4-28	A0A0C4DH34	117 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	SMIM9	A6NGZ8	99 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		A6NHS1	94 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		H3BRN7	92 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	LINC00869	P0C866	280 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	GATA2	P23769	480 aa	Predicted RBP	9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	RAB31	Q13636	194 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	TMEM182	Q6ZP80	229 aa	Predicted RBP	9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	C16orf92	Q96LL3	132 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	SLC25A22	Q9H936	323 aa		9.13	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		A0A0J9YX75	114 aa		9.12	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	TMEM189	A5PLL7	270 aa		9.12	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708	C5orf51	A6NDU8	294 aa		9.12	□□□□□ -0.95
CDK5RAP3-222	ENST00000581708		A8MTW9	85 aa		9.12	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms