RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-215	ENST00000580182	CFD	P00746	253 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	DEFB135	Q30KP9	77 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	KIR2DL5A	Q8N109	375 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	OR1B1	Q8NGR6	318 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	KIR2DL5B	Q8NHK3	375 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	MUC7	Q8TAX7	377 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	NPVF	Q9HCQ7	196 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	NRN1	Q9NPD7	142 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	DOK5	Q9P104	306 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	MGAT4C	Q9UBM8	478 aa		13.74	□□□□□ -0.21
PPP4R1-215	ENST00000580182	KNCN	A6PVL3	124 aa		13.73	□□□□□ -0.21
PPP4R1-215	ENST00000580182	FNDC10	F2Z333	226 aa		13.73	□□□□□ -0.21
PPP4R1-215	ENST00000580182	NUP62	P37198	522 aa	Predicted RBP	13.73	□□□□□ -0.21
PPP4R1-215	ENST00000580182	SLC38A11	Q08AI6	406 aa		13.73	□□□□□ -0.21
PPP4R1-215	ENST00000580182	PFDN2	Q9UHV9	154 aa		13.73	□□□□□ -0.21
PPP4R1-215	ENST00000580182	IGSF23	A1L1A6	192 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	DEDD	O75618	318 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	PVALB	P20472	110 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	PSMG4	Q5JS54	123 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	C1orf194	Q5T5A4	169 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	TEPP	Q6URK8	271 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182		Q6ZWC4	215 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	TMEM217	Q8N7C4	229 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	CSTL1	Q9H114	145 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	SLC25A22	Q9H936	323 aa		13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	LYRM2	Q9NU23	88 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-215	ENST00000580182	ZNF98	A6NK75	572 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	UBE2C	O00762	179 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	SPRY2	O43597	315 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	LINC00869	P0C866	280 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	OR8I2	Q8N0Y5	310 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	TMEM252	Q8N6L7	170 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	TMEM147	Q9BVK8	224 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	GGACT	Q9BVM4	153 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	SLC25A32	Q9H2D1	315 aa		13.71	□□□□□ -0.21
PPP4R1-215	ENST00000580182	AGRN	O00468	2067 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	C3orf84	H3BNL1	204 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	H2BFS	P57053	126 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	LRRC37A5P	Q49AS3	106 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	STH	Q8IWL8	128 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	RNF183	Q96D59	192 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	C17orf77	Q96MU5	243 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SCRT1	Q9BWW7	348 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	NMES1	Q9C002	83 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	FBXL17	Q9UF56	701 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SLC45A2	Q9UMX9	530 aa		13.7	□□□□□ -0.22
PPP4R1-215	ENST00000580182	AGPAT2	O15120	278 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SSNA1	O43805	119 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SULT1A1	P50225	295 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	DEFB1	P60022	68 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SELENOT	P62341	195 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ACTL10	Q5JWF8	245 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	PATE2	Q6UY27	113 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	TRPT1	Q86TN4	253 aa	Known RBP	13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	MGST2	Q99735	147 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	OR5AC2	Q9NZP5	309 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182	TP53TG1	Q9Y2A0	90 aa		13.69	□□□□□ -0.22
PPP4R1-215	ENST00000580182		H0YIZ8	118 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182		H3BRN7	92 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SOCS3	O14543	225 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	HYPM	O75409	117 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	CA1	P00915	261 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	OR5G3	P0C626	314 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	PLP1	P60201	277 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SNRPD3	P62318	126 aa	Known RBP	13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ZFAND6	Q6FIF0	208 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	UHRF2	Q96PU4	802 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ARL6	Q9H0F7	186 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	HIGD1A	Q9Y241	93 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	STARD9	Q9P2P6	4700 aa		13.68	□□□□□ -0.22
PPP4R1-215	ENST00000580182	LYL1	P12980	280 aa		13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	RAP2B	P61225	183 aa		13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	CASC10	Q5T4H9	136 aa		13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	RSG1	Q9BU20	258 aa		13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SEPSECS	Q9HD40	501 aa	Known RBP	13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	UQCC1	Q9NVA1	299 aa		13.67	□□□□□ -0.22
PPP4R1-215	ENST00000580182	GIG44	P09565	113 aa	Predicted RBP	13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	NHLH2	Q02577	135 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	VWC2	Q2TAL6	325 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ZNF546	Q86UE3	836 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	STX12	Q86Y82	276 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	LINC00052	Q96N35	136 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	SHANK2-AS3	Q9BTD1	123 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	WDR83OS	Q9Y284	106 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ALG5	Q9Y673	324 aa		13.66	□□□□□ -0.22
PPP4R1-215	ENST00000580182	CSMD3	Q7Z407	3707 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	UBE2L5P	A0A1B0GUS4	154 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	PTTG1	O95997	202 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	RLN2	P04090	185 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	C4BPB	P20851	252 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	S100A11	P31949	105 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	GALR1	P47211	349 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	CAMLG	P49069	296 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	CYCS	P99999	105 aa	Known RBP	13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	GDF5OS	Q5U4N7	250 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	PPP1R1C	Q8WVI7	109 aa		13.65	□□□□□ -0.22
PPP4R1-215	ENST00000580182	ARV1	Q9H2C2	271 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms