RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GAMTQ14353 236 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 GDF5OSQ5U4N7 250 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 GGNBP1Q5YKI7 109 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 Q6ZR54 194 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 CLVS1Q8IUQ0 354 aaPredicted RBP12.75□□□□□ -0.37
MKS1-209ENST00000580127 C15orf53Q8NAA6 179 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 WDR12Q9GZL7 423 aaKnown RBP12.75□□□□□ -0.37
MKS1-209ENST00000580127 RBKSQ9H477 322 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 SHPKQ9UHJ6 478 aa12.75□□□□□ -0.37
MKS1-209ENST00000580127 GALR1P47211 349 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 ZNF79Q15937 498 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 CTF1Q16619 201 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 SMIM4Q8WVI0 70 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
MKS1-209ENST00000580127 YTHDF2Q9Y5A9 579 aaKnown RBP12.74□□□□□ -0.37
MKS1-209ENST00000580127 B2MP61769 119 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 RPP30P78346 268 aaKnown RBP12.73□□□□□ -0.37
MKS1-209ENST00000580127 ZNF90Q03938 601 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 FAAP20Q6NZ36 180 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 ZNF709Q8N972 641 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 OR51S1Q8NGJ8 323 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 OR4C16Q8NGL9 310 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 SLC35B3Q9H1N7 401 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
MKS1-209ENST00000580127 A0A0J9YX75 114 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 CTDSPLO15194 276 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 IL18Q14116 193 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 DIRAS2Q96HU8 199 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 TRGV9Q99603 122 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 DOK5Q9P104 306 aa12.72□□□□□ -0.37
MKS1-209ENST00000580127 MED6O75586 246 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.37
MKS1-209ENST00000580127 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 DEFB1P60022 68 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 OR2F1Q13607 317 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 LYZL2Q7Z4W2 148 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 GPR82Q96P67 336 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
MKS1-209ENST00000580127 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
MKS1-209ENST00000580127 C1orf158Q8N1D5 194 aa12.7□□□□□ -0.38
MKS1-209ENST00000580127 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
MKS1-209ENST00000580127 RSG1Q9BU20 258 aa12.7□□□□□ -0.38
MKS1-209ENST00000580127 MCUBQ9NWR8 336 aa12.7□□□□□ -0.38
MKS1-209ENST00000580127 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
MKS1-209ENST00000580127 SLC45A2Q9UMX9 530 aa12.7□□□□□ -0.38
MKS1-209ENST00000580127 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 SOCS3O14543 225 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 CTDSP2O14595 271 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 GPR141Q7Z602 305 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 OR4D5Q8NGN0 318 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 OR1B1Q8NGR6 318 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
MKS1-209ENST00000580127 NAA50Q9GZZ1 169 aaKnown RBP12.69□□□□□ -0.38
MKS1-209ENST00000580127 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
MKS1-209ENST00000580127 IGKV1D-37A0A075B6S9 117 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 DUXBA0A1W2PPF3 345 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 ANKRD20A5PA0PJZ0 165 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 F6UB75 175 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 BPIFCQ8NFQ6 507 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
MKS1-209ENST00000580127 INSP01308 110 aa12.67□□□□□ -0.38
MKS1-209ENST00000580127 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
MKS1-209ENST00000580127 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
MKS1-209ENST00000580127 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
MKS1-209ENST00000580127 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
MKS1-209ENST00000580127 FAUP35544 74 aaKnown RBP12.66□□□□□ -0.38
MKS1-209ENST00000580127 CCL18P55774 89 aa12.66□□□□□ -0.38
MKS1-209ENST00000580127 THAP8Q8NA92 274 aa12.66□□□□□ -0.38
MKS1-209ENST00000580127 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
MKS1-209ENST00000580127 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
MKS1-209ENST00000580127 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
MKS1-209ENST00000580127 SLC25A6P12236 298 aa12.65□□□□□ -0.38
MKS1-209ENST00000580127 ORM2P19652 201 aa12.65□□□□□ -0.38
MKS1-209ENST00000580127 TSPOP30536 169 aa12.65□□□□□ -0.38
MKS1-209ENST00000580127 NACAE9PAV3 2078 aa12.65□□□□□ -0.39
MKS1-209ENST00000580127 A8MTW9 85 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 F5H768 121 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
MKS1-209ENST00000580127 ZNF705GA8MUZ8 300 aaPredicted RBP12.63□□□□□ -0.39
MKS1-209ENST00000580127 C16orf90A8MZG2 172 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 PITX3O75364 302 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 NUDT3O95989 172 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 ATP5G1P05496 136 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 IAPPP10997 89 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 ATP5G3P48201 142 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 CNN1P51911 297 aaKnown RBP12.63□□□□□ -0.39
MKS1-209ENST00000580127 AP3S2P59780 193 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 FGL1Q08830 312 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 TMEM256Q8N2U0 113 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
MKS1-209ENST00000580127 NBDYA0A0U1RRE5 68 aa12.62□□□□□ -0.39
MKS1-209ENST00000580127 FABP12A6NFH5 140 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms