RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 Q6ZS46 218 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 C19orf35Q6ZS72 473 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 SSX7Q7RTT5 188 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 TXN2Q99757 166 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 HSPB9Q9BQS6 159 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 C21orf62Q9NYP8 219 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 FBXL7Q9UJT9 491 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
SS18-207ENST00000577636 DNAH3Q8TD57 4116 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 K7EIM0 57 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 OR7C2O60412 319 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 HYPMO75409 117 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 RD3LP0DJH9 198 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 C8orf88P0DMB2 117 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 ORM2P19652 201 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 BLCAPP62952 87 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
SS18-207ENST00000577636 ZNF90Q03938 601 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 ICAM4Q14773 271 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 OR5AU1Q8NGC0 362 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 OR1B1Q8NGR6 318 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 VN1R17PQ8TDU5 208 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 Q8WTZ3 238 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 RARRES2Q99969 163 aa7.9□□□□□ -1.14
SS18-207ENST00000577636 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.14
SS18-207ENST00000577636 AP4M1O00189 453 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 PDE6DO43924 150 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
SS18-207ENST00000577636 OR2J3O76001 311 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 SRP19P09132 144 aaKnown RBP7.89□□□□□ -1.15
SS18-207ENST00000577636 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 EGR2P11161 476 aaPredicted RBP7.89□□□□□ -1.15
SS18-207ENST00000577636 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
SS18-207ENST00000577636 GCHFRP30047 84 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 CST9LP1Q5W188 147 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 UHRF2Q96PU4 802 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 NIPSNAP3BQ9BS92 247 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 TMPRSS5Q9H3S3 457 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 DOK5Q9P104 306 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 DMRT1Q9Y5R6 373 aa7.89□□□□□ -1.15
SS18-207ENST00000577636 IGKV1D-37A0A075B6S9 117 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 F6UZH7 168 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 H3BUA1 57 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 M0R036 132 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 NUPL2O15504 423 aaKnown RBP7.88□□□□□ -1.15
SS18-207ENST00000577636 PAGE4O60829 102 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 TOMM40O96008 361 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 IGHG2P01859 326 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 IGF1P05019 195 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
SS18-207ENST00000577636 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
SS18-207ENST00000577636 LYZP61626 148 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 RHOGP84095 191 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 ATP5G2Q06055 141 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 TIGITQ495A1 244 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 FAM74A3Q4VXF1 159 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 Q8N2B8 174 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 OR51G1Q8NGK1 321 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 EEF1AKMT3Q96AZ1 226 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
SS18-207ENST00000577636 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
SS18-207ENST00000577636 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
SS18-207ENST00000577636 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 SH2D7A6NKC9 451 aaPredicted RBP7.87□□□□□ -1.15
SS18-207ENST00000577636 C9JQL5 133 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
SS18-207ENST00000577636 NDUFB8O95169 186 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 PSG1P11464 419 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 FCGR2BP31994 310 aaPredicted RBP7.87□□□□□ -1.15
SS18-207ENST00000577636 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
SS18-207ENST00000577636 C15orf32Q32M92 178 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
SS18-207ENST00000577636 DPF1Q92782 380 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 ATP6V0BQ99437 205 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 B9D2Q9BPU9 175 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
SS18-207ENST00000577636 G3V318 75 aa7.86□□□□□ -1.15
SS18-207ENST00000577636 AMY1AP04745 511 aa7.86□□□□□ -1.15
SS18-207ENST00000577636 ADCYAP1P18509 176 aa7.86□□□□□ -1.15
SS18-207ENST00000577636 PLP1P60201 277 aa7.86□□□□□ -1.15
SS18-207ENST00000577636 UBE2G2P60604 165 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms