RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
RNF43-202ENST00000577625 ASH1LQ9NR48 2969 aaKnown RBP11.08□□□□□ -0.64
RNF43-202ENST00000577625 MUC21A0A0G2JKD1 596 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 MUC21A0A140T8X8 626 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 CX3CL1P78423 397 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 MUC21Q5SSG8 566 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 Q8N7P7 452 aa11.08□□□□□ -0.64
RNF43-202ENST00000577625 FAM181BA6NEQ2 426 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 MC5RP33032 325 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
RNF43-202ENST00000577625 Q56UQ5 140 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 OR1B1Q8NGR6 318 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 NAV3Q8IVL0 2385 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 TRAV8-6A0A0B4J262 113 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 A0A1B0GV72 72 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 K7EN84 100 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 RRHO14718 337 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 UBE2G1P62253 170 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 PSG3Q16557 428 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 V9GYV3 84 aa11.07□□□□□ -0.64
RNF43-202ENST00000577625 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 PRSS46E5RG02 174 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 BMPR1BO00238 502 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 COX7A1P24310 79 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 GTF2H5Q6ZYL4 71 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 OR4A5Q8NH83 315 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 VSTM2AQ8TAG5 236 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 ENY2Q9NPA8 101 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 C9JCJ5 164 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 BUB1B-PAK6H3BSN5 160 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 MYOD1P15172 320 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
RNF43-202ENST00000577625 Q5PR19 223 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 S100A7AQ86SG5 101 aa11.06□□□□□ -0.64
RNF43-202ENST00000577625 CRYBG3Q68DQ2 2970 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 TEX50A0A1B0GTY4 177 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 M0R1W7 72 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 IGHV4-39P01824 125 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 AMY1AP04745 511 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 CD1BP29016 333 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 SRSF1Q07955 248 aaKnown RBP eCLIP11.05□□□□□ -0.643e-7■■□□□ 12.7
RNF43-202ENST00000577625 UFSP1Q6NVU6 142 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 AMMECR1Q9Y4X0 333 aaPredicted RBP11.05□□□□□ -0.64
RNF43-202ENST00000577625 CHD6Q8TD26 2715 aa11.05□□□□□ -0.64
RNF43-202ENST00000577625 IGLV2-23P01705 113 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 HLA-DRB1P01911 266 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 OR10J4P0C629 311 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 DEFA4P12838 97 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 NPY1RP25929 384 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
RNF43-202ENST00000577625 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
RNF43-202ENST00000577625 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 WFDC12Q8WWY7 111 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 A0A1W2PPV4 95 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 HSBP1O75506 76 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 CCL19Q99731 98 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 COMMD5Q9GZQ3 224 aa11.04□□□□□ -0.64
RNF43-202ENST00000577625 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 A6NJY4 79 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 LY6LH3BQJ8 138 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 M0R2Z0 102 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 APCSP02743 223 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 ATP5IP56385 69 aaPredicted RBP11.03□□□□□ -0.64
RNF43-202ENST00000577625 VMA21Q3ZAQ7 101 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 C18orf32Q8TCD1 76 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 EAF1Q96JC9 268 aaPredicted RBP11.03□□□□□ -0.64
RNF43-202ENST00000577625 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 IGHV3-72A0A0B4J1Y9 119 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 GNG7O60262 68 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 MPDU1O75352 247 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 SCGB2A2Q13296 93 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 HCP5Q6MZN7 132 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 KIR3DL3Q8N743 410 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 OR11H6Q8NGC7 330 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 OR1L8Q8NGR8 309 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 RITA1Q96K30 269 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 NDUFA4L2Q9NRX3 87 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 C1RLQ9NZP8 487 aa11.03□□□□□ -0.64
RNF43-202ENST00000577625 INS-IGF2F8WCM5 200 aa11.02□□□□□ -0.65
RNF43-202ENST00000577625 SMIM17P0DL12 118 aa11.02□□□□□ -0.65
RNF43-202ENST00000577625 PRTN3P24158 256 aa11.02□□□□□ -0.65
RNF43-202ENST00000577625 CRYBB3P26998 211 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms