RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PXDC1Q5TGL8 231 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 MIC13Q5XKP0 118 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 STPG3Q8N7X2 389 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 RNF2Q99496 336 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 NPCDR1Q9BY65 106 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 WFDC1Q9HC57 220 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-209ENST00000572760 IGKV3-7A0A075B6H7 116 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 HMSDA8MTL9 139 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 COX7A2P2O60397 106 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 CD5P06127 495 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 GP9P14770 177 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 RPL29P47914 159 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 TCF24Q7RTU0 167 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 TMEM61Q8N0U2 210 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 VSIRQ9H7M9 311 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.65
NPLOC4-209ENST00000572760 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 PLP1P60201 277 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 PAFAH1B2P68402 229 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 OR11H4Q8NGC9 324 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 U3KQE9 123 aa10.95□□□□□ -0.66
NPLOC4-209ENST00000572760 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 NOTCH1P46531 2555 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 HELTA6NFD8 242 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 TAAR5O14804 337 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 BUB3O43684 328 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR20EP86478 221 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR20CP86479 221 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR20DP86480 221 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR20BP86481 221 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR20AP86496 221 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 C16orf54Q6UWD8 224 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 OR8I2Q8N0Y5 310 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PRR25Q96S07 402 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PFDN5Q99471 154 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 RSG1Q9BU20 258 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 SLC25A22Q9H936 323 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 RNF24Q9Y225 148 aa10.94□□□□□ -0.66
NPLOC4-209ENST00000572760 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 A0A0D9SG52 128 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 ZNF98A6NK75 572 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 DNASE2O00115 360 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 TSPAN4O14817 238 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 C1QBP02746 253 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 TFPI2P48307 235 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 ZNF345Q14585 488 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 GTSCR1Q86UQ5 136 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 HSD17B11Q8NBQ5 300 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 HYLS1Q96M11 299 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 UHRF2Q96PU4 802 aa10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-209ENST00000572760 OR4C46A6NHA9 309 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 PFDN1O60925 122 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 PRB2P02812 416 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 C1orf194Q5T5A4 169 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 RPL7L1Q6DKI1 246 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 PATE2Q6UY27 113 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 GLMPQ8WWB7 406 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 SCRT1Q9BWW7 348 aa10.92□□□□□ -0.66
NPLOC4-209ENST00000572760 H3BRN7 92 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 JTBO76095 146 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 GALR1P47211 349 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 ZFP69Q49AA0 526 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 FAM90A2PQ658T7 463 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 TMEM37Q8WXS4 190 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 TIMM9Q9Y5J7 89 aa10.91□□□□□ -0.66
NPLOC4-209ENST00000572760 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 CXCL2P19875 107 aa10.9□□□□□ -0.66
NPLOC4-209ENST00000572760 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms