RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 TMEM144Q7Z5S9 345 aa12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 ZNF431Q8TF32 576 aaPredicted RBP12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 FBXL17Q9UF56 701 aa12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.33
CTDNEP1-207ENST00000572043 FAM240BA0A1B0GVZ2 78 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 C5orf51A6NDU8 294 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 MBPP02686 304 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 IL5P05113 134 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 NANOS2P60321 138 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 ZNF846Q147U1 533 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 CEMP1Q6PRD7 247 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 TMEM14EPQ6UXP3 125 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 TMEM147Q9BVK8 224 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 SLC25A32Q9H2D1 315 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 LSM5Q9Y4Y9 91 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-207ENST00000572043 H3BMM0 161 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 ID1P41134 155 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 OR10P1Q8NGE3 313 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 S100ZQ8WXG8 99 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 TENM2Q9NT68 2774 aa12.94□□□□□ -0.34
CTDNEP1-207ENST00000572043 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 ZNF98A6NK75 572 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 L7N2F9 121 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 SOCS3O14543 225 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 ATF4P18848 351 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 FXYD7P58549 80 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 VAMP2P63027 116 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 DLK1P80370 383 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 MZT2BQ6NZ67 158 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 C12orf45Q8N5I9 185 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 C11orf45Q8TAV5 145 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 PHLDA1Q8WV24 401 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 C11orf68Q9H3H3 251 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 XCL2Q9UBD3 114 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
CTDNEP1-207ENST00000572043 IGHV4-28A0A0C4DH34 117 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 A6NHS1 94 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 TSC22D2O75157 780 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 LINC00869P0C866 280 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 HLA-DRB4P13762 266 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 GALR1P47211 349 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 PSMB3P49720 205 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 BCAP31P51572 246 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 SLC38A11Q08AI6 406 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 C16orf92Q96LL3 132 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 HLA-DRB4X5D2U9 266 aa12.92□□□□□ -0.34
CTDNEP1-207ENST00000572043 CSMD3Q7Z407 3707 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 F6UB75 175 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 OR5G3P0C626 314 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 TAS2R30P59541 319 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 RAP2BP61225 183 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 LINC00299Q6ZSB3 139 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 Q8NAQ8 132 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 C20orf173Q96LM9 149 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 NPVFQ9HCQ7 196 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
CTDNEP1-207ENST00000572043 K7EPK0 472 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 LY6G6CO95867 125 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 CAV2P51636 162 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 S100A10P60903 97 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 FGL1Q08830 312 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 ASAH1Q13510 395 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 HIGD1AQ9Y241 93 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 KLK5Q9Y337 293 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 X6R8D5 127 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 RYR2Q92736 4967 aa12.9□□□□□ -0.34
CTDNEP1-207ENST00000572043 ZNF705EA8MWA4 302 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 H3BRN7 92 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 ISLRO14498 428 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 HYPMO75409 117 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 IGFL4Q6B9Z1 124 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 ENKURQ8TC29 256 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 C17orf77Q96MU5 243 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
CTDNEP1-207ENST00000572043 ARL6Q9H0F7 186 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms