RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 IFITM10A6NMD0 228 aa14.25□□□□□ -0.13
SMPD3-211ENST00000568373 ISLRO14498 428 aa14.25□□□□□ -0.13
SMPD3-211ENST00000568373 SLC25A5P05141 298 aaKnown RBP14.25□□□□□ -0.13
SMPD3-211ENST00000568373 YPEL3P61236 119 aaPredicted RBP14.25□□□□□ -0.13
SMPD3-211ENST00000568373 SRSF1Q07955 248 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMPD3-211ENST00000568373 RNF125Q96EQ8 232 aa14.25□□□□□ -0.13
SMPD3-211ENST00000568373 RNASE7Q9H1E1 156 aaKnown RBP14.25□□□□□ -0.13
SMPD3-211ENST00000568373 F8W735 103 aaPredicted RBP14.24□□□□□ -0.13
SMPD3-211ENST00000568373 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
SMPD3-211ENST00000568373 MGST1P10620 155 aaKnown RBP14.24□□□□□ -0.13
SMPD3-211ENST00000568373 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
SMPD3-211ENST00000568373 GNG5P63218 68 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 SHANK2-AS3Q9BTD1 123 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 PITPNC1Q9UKF7 332 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 IGHV4-30-2A0A087WSY4 118 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 TRAV34A0A0B4J273 112 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 IL4P05112 153 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
SMPD3-211ENST00000568373 RPEL1Q2QD12 228 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 GFI1BQ5VTD9 330 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 TMEM68Q96MH6 324 aa14.24□□□□□ -0.13
SMPD3-211ENST00000568373 IGHV1-69DA0A0B4J2H0 117 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 WI2-2373I1.2A0A1W2PRP0 233 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 H3BRN7 92 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 OR2J3O76001 311 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 NDUFB8O95169 186 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 IGHV1-69P01742 117 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 HIST1H1EP10412 219 aaKnown RBP14.23□□□□□ -0.13
SMPD3-211ENST00000568373 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 Q56UQ5 140 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 HIST3H2BBQ8N257 126 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 C5orf17Q8NAS9 161 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 Q9H3A6 140 aa14.23□□□□□ -0.13
SMPD3-211ENST00000568373 H3BTX0 84 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 IBA57Q5T440 356 aaKnown RBP14.22□□□□□ -0.13
SMPD3-211ENST00000568373 BAGE2Q86Y30 109 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 NHLRC2Q8NBF2 726 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 ZNF586Q9NXT0 402 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 KLF12Q9Y4X4 402 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
SMPD3-211ENST00000568373 ATG101Q9BSB4 218 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 TMUB1Q9BVT8 246 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 GAR1Q9NY12 217 aaKnown RBP14.22□□□□□ -0.13
SMPD3-211ENST00000568373 TRAPPC1Q9Y5R8 145 aa14.22□□□□□ -0.13
SMPD3-211ENST00000568373 HELZ2Q9BYK8 2649 aaKnown RBP14.22□□□□□ -0.13
SMPD3-211ENST00000568373 IGHV3OR16-10A0A075B7F0 116 aa14.21□□□□□ -0.13
SMPD3-211ENST00000568373 ATP6V0E1O15342 81 aa14.21□□□□□ -0.13
SMPD3-211ENST00000568373 UBE2G1P62253 170 aa14.21□□□□□ -0.13
SMPD3-211ENST00000568373 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 PCP4L1A6NKN8 68 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 UNQ5815/PRO19632Q6UWF5 114 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 BPIFA4PQ86YQ2 179 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 OTORQ9NRC9 128 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 FBXL7Q9UJT9 491 aa14.21□□□□□ -0.14
SMPD3-211ENST00000568373 S100A2P29034 98 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 USF2Q15853 346 aaPredicted RBP14.2□□□□□ -0.14
SMPD3-211ENST00000568373 ECSCRQ19T08 205 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 PDZD11Q5EBL8 140 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 S100A7AQ86SG5 101 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 C5orf56Q8N8D9 126 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 RPH3ALQ9UNE2 315 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 CELSR2Q9HCU4 2923 aa14.2□□□□□ -0.14
SMPD3-211ENST00000568373 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 FCGR2BP31994 310 aaPredicted RBP14.19□□□□□ -0.14
SMPD3-211ENST00000568373 KLK9Q2XQG4 91 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 COA6Q5JTJ3 125 aaKnown RBP14.19□□□□□ -0.14
SMPD3-211ENST00000568373 OR8I2Q8N0Y5 310 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 SMIM12Q96EX1 92 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 TXN2Q99757 166 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 KLK9Q9UKQ9 250 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 RNF24Q9Y225 148 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 XKRY2A2RUG3 117 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 SCGB2A1O75556 95 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 TCRAP04437 139 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 IGLC2P0DOY2 106 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 BRD3OSQ6XYD6 125 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 FAM231DQ6ZW35 169 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 TMEM183AQ8IXX5 376 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 OR4F17Q8NGA8 305 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 VN1R17PQ8TDU5 208 aa14.19□□□□□ -0.14
SMPD3-211ENST00000568373 MAP1AP78559 2803 aaPredicted RBP14.18□□□□□ -0.14
SMPD3-211ENST00000568373 CELSR1Q9NYQ6 3014 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 OR2T8A6NH00 312 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 MSMBP08118 114 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 FMC1Q96HJ9 113 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 TRBV19A0A075B6N1 114 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 ZNF705GA8MUZ8 300 aaPredicted RBP14.18□□□□□ -0.14
SMPD3-211ENST00000568373 CTSGP08311 255 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 TMEM190Q8WZ59 177 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 NRGNQ92686 78 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 GPR82Q96P67 336 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 SERTAD4Q9NUC0 356 aa14.18□□□□□ -0.14
SMPD3-211ENST00000568373 SMIM27A0A1W2PRY6 76 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 SH2D7A6NKC9 451 aaPredicted RBP14.17□□□□□ -0.14
SMPD3-211ENST00000568373 MRPS12O15235 138 aaKnown RBP14.17□□□□□ -0.14
SMPD3-211ENST00000568373 TMEM219Q86XT9 240 aa14.17□□□□□ -0.14
SMPD3-211ENST00000568373 BCL6BQ8N143 479 aaPredicted RBP14.17□□□□□ -0.14
SMPD3-211ENST00000568373 PIFOQ8TCI5 191 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms