RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZNF709Q8N972 641 aa3.64□□□□□ -1.83
SMG1-207ENST00000563235 OR10G8Q8NGN5 311 aa3.64□□□□□ -1.83
SMG1-207ENST00000563235 GEMIN6Q8WXD5 167 aaKnown RBP3.64□□□□□ -1.83
SMG1-207ENST00000563235 MRPS16Q9Y3D3 137 aaKnown RBP3.64□□□□□ -1.83
SMG1-207ENST00000563235 CD300LBA8K4G0 201 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 PSPHP1O15172 72 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 CAV3P56539 151 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 FOXF1Q12946 379 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 C11orf87Q6NUJ2 197 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 EBLN2Q6P2I7 272 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 TMEM183AQ8IXX5 376 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 OR2A12Q8NGT7 310 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 KLK5Q9Y337 293 aaPredicted RBP3.63□□□□□ -1.83
SMG1-207ENST00000563235 MPC1Q9Y5U8 109 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 CHD8Q9HCK8 2581 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 PATE3B3GLJ2 98 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 MGST3O14880 152 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 ZNF253O75346 499 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 TSHBP01222 138 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 PSMB2P49721 201 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 SLC25A34Q6PIV7 304 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 Q6ZS49 121 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 AAED1Q7RTV5 226 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 LINC00305Q7Z4B0 112 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 OTOSQ8NHW6 89 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 TMEM158Q8WZ71 300 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 GNPNAT1Q96EK6 184 aaPredicted RBP3.63□□□□□ -1.83
SMG1-207ENST00000563235 SMDT1Q9H4I9 107 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 CYTL1Q9NRR1 136 aa3.63□□□□□ -1.83
SMG1-207ENST00000563235 CHCHD2Q9Y6H1 151 aaPredicted RBP3.63□□□□□ -1.83
SMG1-207ENST00000563235 VCANP13611 3396 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 TRAV1-2A0A0B4J238 106 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 IGLC7A0M8Q6 106 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 C9orf118A6NHY6 69 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 M0R378 163 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 ZNF73O43830 326 aaPredicted RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 ZNF883P0CG24 379 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 TPT1P13693 172 aaKnown RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 CRYGSP22914 178 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 OPRM1P35372 400 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 TMEM258P61165 79 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 C22orf39Q6P5X5 142 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 ZNF880Q6PDB4 577 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 NYNRINQ9P2P1 1898 aaKnown RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 TRBV20OR9-2A0A075B6H5 130 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 GRIFINA4D1Z8 144 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 DPRXA6NFQ7 191 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 UPK2O00526 184 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 SLC25A6P12236 298 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 ZNF80P51504 273 aaPredicted RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 TFF2Q03403 129 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 ZNF90Q03938 601 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 LINC00303Q3SY05 128 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 C1orf140Q5VVS0 124 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 DRAM1Q8N682 238 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 OR4X2Q8NGF9 303 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 MRPL30Q8TCC3 161 aaKnown RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 RPS4Y2Q8TD47 263 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 C11orf52Q96A22 123 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 PGLYRP2Q96PD5 576 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 OR2A5Q96R48 311 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 PARP12Q9H0J9 701 aaKnown RBP3.62□□□□□ -1.83
SMG1-207ENST00000563235 UNC79Q9P2D8 2635 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 POLEQ07864 2286 aa3.62□□□□□ -1.83
SMG1-207ENST00000563235 SNRNP200O75643 2136 aaKnown RBP3.61□□□□□ -1.83
SMG1-207ENST00000563235 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 MEIS3P1A6NDR6 274 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 TLCD2A6NGC4 264 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 J3QRE1 110 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 K7EP34 96 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 COX7A2LO14548 114 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 JTBO76095 146 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 HINT1P49773 126 aaPredicted RBP3.61□□□□□ -1.83
SMG1-207ENST00000563235 TMEM183BQ1AE95 376 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 UBE2NLQ5JXB2 153 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 ZC2HC1BQ5TFG8 222 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 STPG1Q5TH74 334 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 RUSC1-AS1Q66K80 236 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 TEX43Q6ZNM6 134 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 SLC25A26Q70HW3 274 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 C15orf40Q8WUR7 153 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 CCL13Q99616 98 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 IMUPQ9GZP8 106 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 UQCR10Q9UDW1 63 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
SMG1-207ENST00000563235 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 H3BMG7 143 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 ETV2O00321 342 aaPredicted RBP3.61□□□□□ -1.83
SMG1-207ENST00000563235 SOCS1O15524 211 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 IGHV4-59P01825 116 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 LINC00869P0C866 280 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 TAS2R19P59542 299 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
SMG1-207ENST00000563235 CCL14Q16627 93 aa3.61□□□□□ -1.83
SMG1-207ENST00000563235 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms