RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C11orf45Q8TAV5 145 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 SEC22CQ9BRL7 303 aa9.11□□□□□ -0.95
SMAD3-208ENST00000558827 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 FAM25EA8MYX2 175 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 F6UB75 175 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 FABP1P07148 127 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
SMAD3-208ENST00000558827 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 PAX9P55771 341 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
SMAD3-208ENST00000558827 RBMY1FQ15415 496 aaKnown RBP9.1□□□□□ -0.95
SMAD3-208ENST00000558827 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 TMEM217Q8N7C4 229 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 ZBTB8BQ8NAP8 495 aaPredicted RBP9.1□□□□□ -0.95
SMAD3-208ENST00000558827 OR1B1Q8NGR6 318 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 C7orf50Q9BRJ6 194 aaKnown RBP9.1□□□□□ -0.95
SMAD3-208ENST00000558827 C20orf85Q9H1P6 137 aa9.1□□□□□ -0.95
SMAD3-208ENST00000558827 H3BMM0 161 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 TCRBP04435 133 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 SPP1P10451 314 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
SMAD3-208ENST00000558827 ZNF767PQ75MW2 155 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 RSG1Q9BU20 258 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 SLC25A32Q9H2D1 315 aa9.09□□□□□ -0.95
SMAD3-208ENST00000558827 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
SMAD3-208ENST00000558827 IGHV3OR16-12A0A075B7B8 117 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF98A6NK75 572 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 PMS2P5A8MQ11 134 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 IL5P05113 134 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 FGL1Q08830 312 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 ARL16Q0P5N6 197 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 CYP2G1PQ6ZSU1 146 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 Q8NAQ8 132 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 BPIFCQ8NFQ6 507 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 OR4B1Q8NGF8 309 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 SMIM8Q96KF7 97 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 SCRT1Q9BWW7 348 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 PFDN2Q9UHV9 154 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
SMAD3-208ENST00000558827 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
SMAD3-208ENST00000558827 X6R8D5 127 aa9.08□□□□□ -0.96
SMAD3-208ENST00000558827 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
SMAD3-208ENST00000558827 ELOA3CA0A087WX78 387 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-208ENST00000558827 C5orf51A6NDU8 294 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 MBPP02686 304 aaPredicted RBP9.07□□□□□ -0.96
SMAD3-208ENST00000558827 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
SMAD3-208ENST00000558827 ID1P41134 155 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 CNPY1Q3B7I2 92 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 C16orf92Q96LL3 132 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 TMEM147Q9BVK8 224 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 NUDT15Q9NV35 164 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 TBC1D24Q9ULP9 559 aa9.07□□□□□ -0.96
SMAD3-208ENST00000558827 SOCS3O14543 225 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 H2AFB2P0C5Z0 115 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 OR5G3P0C626 314 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF705DP0CH99 300 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF705BP0CI00 300 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-208ENST00000558827 HLA-DRB4P13762 266 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 NUP62P37198 522 aaPredicted RBP9.06□□□□□ -0.96
SMAD3-208ENST00000558827 BCAP31P51572 246 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 SLC38A11Q08AI6 406 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 C1orf194Q5T5A4 169 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 TMEM14EPQ6UXP3 125 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 UHRF2Q96PU4 802 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 SLC35B3Q9H1N7 401 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
SMAD3-208ENST00000558827 PTTG2Q9NZH5 202 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 HLA-DRB4X5D2U9 266 aa9.06□□□□□ -0.96
SMAD3-208ENST00000558827 FAM240BA0A1B0GVZ2 78 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 C7orf66A4D0T2 115 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 L7N2F9 121 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 LINC00869P0C866 280 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 GALR1P47211 349 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 EMP1P54849 157 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 VAMP2P63027 116 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF846Q147U1 533 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 C12orf45Q8N5I9 185 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-208ENST00000558827 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 OR10P1Q8NGE3 313 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-208ENST00000558827 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
SMAD3-208ENST00000558827 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
SMAD3-208ENST00000558827 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 ZNF705EA8MWA4 302 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-208ENST00000558827 IGLL5B9A064 214 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 K7EPK0 472 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 HYPMO75409 117 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 DEDDO75618 318 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 CST7O76096 145 aa9.04□□□□□ -0.96
SMAD3-208ENST00000558827 CFDP00746 253 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-208ENST00000558827 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms