RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TIAF1O95411 115 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 NRN1LQ496H8 165 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 PREX1Q8TCU6 1659 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 TRAV41A0A0B4J266 112 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 C4orf51C9J302 202 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 FHL1Q13642 323 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 ASCL5Q7RTU5 278 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 IGHV5-10-1A0A0J9YXX1 117 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 EFEMP2O95967 443 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 SSC4DQ8WTU2 575 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 NEU4Q8WWR8 484 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-248ENST00000558190 LHFPL1Q86WI0 220 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 AKAP12Q02952 1782 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM213A2RRL7 107 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 TET1Q8NFU7 2136 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 SLC25A20O43772 301 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 RHOHQ15669 191 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 TRAV17A0A0B4J275 112 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 FOXI1Q12951 378 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 PAX1P15863 534 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 SPANXB1Q9NS25 103 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-248ENST00000558190 ARPC1AQ92747 370 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV1-6A0A0C4DH72 117 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 MRAPQ8TCY5 172 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 VWDEQ8N2E2 1590 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 ADARB2-AS1A8MUL3 147 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 C6orf226Q5I0X4 101 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 CCDC144NLQ6NUI1 221 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 PMS2P5A8MQ11 134 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 CD7P09564 240 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 TDHQ8IZJ6 230 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 IQCF6A8MYZ5 107 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 J3QW42 95 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 DUTP33316 252 aaKnown RBP3.02□□□□□ -1.93
ATXN3-248ENST00000558190 PSG7Q13046 419 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
ATXN3-248ENST00000558190 SH2D1AO60880 128 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 KIF1AQ12756 1690 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 PLNP26678 52 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 NTN3O00634 580 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 A0A0U1RQV1 116 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV1D-33P01593 117 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 IGKV1-33P01594 117 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 SVIPQ8NHG7 77 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 NTN5Q8WTR8 489 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM133Q9H2Q1 129 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 VWC2LB2RUY7 222 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TM4SF5O14894 197 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CLUHP3Q96NS8 147 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 SPRY2O43597 315 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 MUC4Q99102 2169 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CD3EP07766 207 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CHD2O14647 1828 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 LILRA5A6NI73 299 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 GNRH2O43555 120 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 ARHGAP23Q9P227 1491 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CSRP1P21291 193 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 PRRC2AP48634 2157 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CD69Q07108 199 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF142P52746 1687 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF71Q9NQZ8 489 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 E9PLN8 166 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CFAP161Q6P656 301 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 A0A087WX48 190 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 RS1O15537 224 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TMEM258P61165 79 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 ECSCRQ19T08 205 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 CT83Q5H943 113 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TRPM6Q9BX84 2022 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 RPL36AP83881 106 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 RPL36ALQ969Q0 106 aaKnown RBP3.01□□□□□ -1.93
ATXN3-248ENST00000558190 TCRBV4S1A1TA0A5B7 111 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 C5orf47Q569G3 176 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 ZNF524Q96C55 264 aa3.01□□□□□ -1.93
ATXN3-248ENST00000558190 OSR1Q8TAX0 266 aaPredicted RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 ABCA2Q9BZC7 2435 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 A0A1W2PPI3 338 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 CD177Q8N6Q3 437 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 M0QXV9 152 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 GDF5OSQ5U4N7 250 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 LINC01565O15544 149 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 GATD1Q8NB37 220 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 MRPL51Q4U2R6 128 aaKnown RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 FN1P02751 2386 aaKnown RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 UBE2L6O14933 153 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 DNAJC30Q96LL9 226 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 SLC25A39Q9BZJ4 359 aaPredicted RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 MYH14Q7Z406 1995 aaKnown RBP3□□□□□ -1.93
ATXN3-248ENST00000558190 SAA2-SAA4A0A096LPE2 208 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 TRGV9Q99603 122 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 A0A0G2JRQ6 117 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 LINC01560Q8TB33 94 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 A0A087WWL8 130 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 C2CD4DB7Z1M9 353 aa3□□□□□ -1.93
ATXN3-248ENST00000558190 SYNJ2BPP57105 145 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 1004.9 ms