RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 IGKV1OR2-108A0A075B7D4 117 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 A0A0G2JLM5 398 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 TCRBV4S1A1TA0A5B7 111 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 FNDC10F2Z333 226 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 TRBV12-3P01733 135 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 IGHV3-11P01762 117 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 HOXD3P31249 432 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-212ENST00000554486 S100A11P31949 105 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 NUP62P37198 522 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-212ENST00000554486 RND2P52198 227 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 AP2S1P53680 142 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-212ENST00000554486 MFAP4P55083 255 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 HBG1P69891 147 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 HBG2P69892 147 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 CLINT1Q14677 625 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 VWC2Q2TAL6 325 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF343Q6P1L6 599 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 C9orf62Q8N4C0 152 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 KCNRGQ8N5I3 272 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 OR4X2Q8NGF9 303 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 OR5C1Q8NGR4 320 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 OR4X1Q8NH49 305 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF502Q8TBZ5 544 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 TMEM158Q8WZ71 300 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 EEF1AKMT3Q96AZ1 226 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF414Q96IQ9 312 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 SLC35E1Q96K37 410 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 UBE2E2Q96LR5 201 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 HYLS1Q96M11 299 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 CITED2Q99967 270 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-212ENST00000554486 TMEM147Q9BVK8 224 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 GGACTQ9BVM4 153 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 SMIM3Q9BZL3 60 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 ZC4H2Q9NQZ6 224 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 C21orf62Q9NYP8 219 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 FBXL17Q9UF56 701 aa4.82□□□□□ -1.64
SCFD1-212ENST00000554486 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.81□□□□□ -1.64
SCFD1-212ENST00000554486 TRBV7-1A0A0A6YYK4 115 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 A0A0D9SG52 128 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 UBE2L5PA0A1B0GUS4 154 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 I3L521 148 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CLN5O75503 358 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 IGKV1-17P01599 117 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 LGALS1P09382 135 aaKnown RBP4.81□□□□□ -1.64
SCFD1-212ENST00000554486 IGLC1P0CG04 106 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 FCGR2BP31994 310 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CDX1P47902 265 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-212ENST00000554486 AMTP48728 403 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 ZNF345Q14585 488 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 ATP6V1FQ16864 119 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 ETFRF1Q6IPR1 90 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CLEC19AQ6UXS0 136 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 TMUB2Q71RG4 321 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 TMEM144Q7Z5S9 345 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 ACY3Q96HD9 319 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 OR5B12Q96R08 314 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 TXN2Q99757 166 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 ATP5SQ99766 215 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CITED1Q99966 193 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 FAM110AQ9BQ89 295 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CHRDL1Q9BU40 450 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 CYTL1Q9NRR1 136 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 UQCC1Q9NVA1 299 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 WDR83OSQ9Y284 106 aa4.81□□□□□ -1.64
SCFD1-212ENST00000554486 TSSC4Q9Y5U2 329 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-212ENST00000554486 SMCO3A2RU48 225 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 OR2T8A6NH00 312 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 PPP5D1E7EU14 171 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 BMPR1BO00238 502 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 BCL2L11O43521 198 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 GNG7O60262 68 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 DFFBO76075 338 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 NDUFB4O95168 129 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 CTSGP08311 255 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 OR10J1P30954 320 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 GPR183P32249 361 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 NPBWR1P48145 328 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 NANOS2P60321 138 aaKnown RBP4.8□□□□□ -1.64
SCFD1-212ENST00000554486 RUNX1Q01196 453 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 AKR1C1Q04828 323 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 DEFB136Q30KP8 78 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 TIGITQ495A1 244 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 Q56UQ5 140 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 RPL7L1Q6DKI1 246 aaKnown RBP4.8□□□□□ -1.64
SCFD1-212ENST00000554486 UBAC2Q8NBM4 344 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 C4orf3Q8WVX3 66 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 ATP6V0BQ99437 205 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 TRGV9Q99603 122 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 MGST2Q99735 147 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 PARD6GQ9BYG4 376 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-212ENST00000554486 WDR61Q9GZS3 305 aaKnown RBP4.8□□□□□ -1.64
SCFD1-212ENST00000554486 ARL6Q9H0F7 186 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 NPVFQ9HCQ7 196 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 PEF1Q9UBV8 284 aaKnown RBP4.8□□□□□ -1.64
SCFD1-212ENST00000554486 RFNGQ9Y644 331 aa4.8□□□□□ -1.64
SCFD1-212ENST00000554486 IGHV4OR15-8A0A075B7B6 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms