RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 LEMD1Q68G75 181 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 PRSS54Q6PEW0 395 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 TRPT1Q86TN4 253 aaKnown RBP4.82□□□□□ -1.64
SLIRP-203ENST00000554074 FAM24BQ8N5W8 94 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 Q8WTZ3 238 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 GGACTQ9BVM4 153 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 MED28Q9H204 178 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 RABAC1Q9UI14 185 aa4.82□□□□□ -1.64
SLIRP-203ENST00000554074 STRAPQ9Y3F4 350 aaKnown RBP4.82□□□□□ -1.64
SLIRP-203ENST00000554074 ZNF705EA8MWA4 302 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-203ENST00000554074 FAM25EA8MYX2 175 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 C11orf94C9JXX5 98 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 L7N2F9 121 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 TOMM40O96008 361 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 MBPP02686 304 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-203ENST00000554074 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-203ENST00000554074 OR10J1P30954 320 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 NUP62P37198 522 aaPredicted RBP4.81□□□□□ -1.64
SLIRP-203ENST00000554074 RND2P52198 227 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 VAMP2P63027 116 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 FGL1Q08830 312 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 C16orf54Q6UWD8 224 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 Q8NAQ8 132 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 GSKIPQ9P0R6 139 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 ALG5Q9Y673 324 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 HERC2O95714 4834 aa4.81□□□□□ -1.64
SLIRP-203ENST00000554074 KMT2AQ03164 3969 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 E5RGE8 158 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 K7EPK0 472 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 GOSR2O14653 212 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 BUB3O43684 328 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 IL4P05112 153 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 FABP1P07148 127 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 GIPP09681 153 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 ZNF688P0C7X2 276 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 RD3LP0DJH9 198 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 NANOS2P60321 138 aaKnown RBP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 RRAS2P62070 204 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 POLR2GP62487 172 aaKnown RBP eCLIP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 OR8G2PQ6IF36 304 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 C2CD4CQ8TF44 421 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 NPIPB3Q92617 1050 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 PSENENQ9NZ42 101 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 MGAT4CQ9UBM8 478 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 PFDN2Q9UHV9 154 aa4.8□□□□□ -1.64
SLIRP-203ENST00000554074 RCL1Q9Y2P8 373 aaKnown RBP4.8□□□□□ -1.64
SLIRP-203ENST00000554074 IGHV4-28A0A0C4DH34 117 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 KNCNA6PVL3 124 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 CCSO14618 274 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SSSCA1O60232 199 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 DEDDO75618 318 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 NXPH3O95157 252 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SCGB1D2O95969 90 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 CFDP00746 253 aaPredicted RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 RBMY1A1P0DJD3 496 aaKnown RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 RBMY1CP0DJD4 496 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 PSG1P11464 419 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 C4BPBP20851 252 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 S100A7P31151 101 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 H2BFSP57053 126 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 RAP2BP61225 183 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 NUTF2P61970 127 aaKnown RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SNRPD3P62318 126 aaKnown RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 HBG1P69891 147 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 HBG2P69892 147 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 DLK1P80370 383 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 BAXQ07812 192 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 RBMY1FQ15415 496 aaKnown RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 ATP6V1FQ16864 119 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 PSMG4Q5JS54 123 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 ACTL10Q5JWF8 245 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SPANXN5Q5MJ07 72 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 C1orf194Q5T5A4 169 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 TMEM14EPQ6UXP3 125 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 STX12Q86Y82 276 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 OR10P1Q8NGE3 313 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 OR51G1Q8NGK1 321 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 RNF125Q96EQ8 232 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SLC35E1Q96K37 410 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 SLC25A31Q9H0C2 315 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 MAGT1Q9H0U3 335 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 NRN1Q9NPD7 142 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 LYRM2Q9NU23 88 aaPredicted RBP4.79□□□□□ -1.64
SLIRP-203ENST00000554074 FBXL17Q9UF56 701 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 X6R8D5 127 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
SLIRP-203ENST00000554074 TRAV10A0A0B4J240 114 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 PRSS46E5RG02 174 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 H3BMM0 161 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 J3QL48 77 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms