RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 DEFB114Q30KQ6 69 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 ZFP69Q49AA0 526 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 STPG3Q8N7X2 389 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 OR11H4Q8NGC9 324 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 OR1B1Q8NGR6 318 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 GNPNAT1Q96EK6 184 aaPredicted RBP13.05□□□□□ -0.32
ITGA5-213ENST00000553071 ARL6Q9H0F7 186 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 VSIRQ9H7M9 311 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 U3KQE9 123 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 VWFP04275 2813 aa13.05□□□□□ -0.32
ITGA5-213ENST00000553071 KANTRA0A1W2PQU2 76 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 OR5G3P0C626 314 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 GATA2P23769 480 aaPredicted RBP13.04□□□□□ -0.32
ITGA5-213ENST00000553071 OXLD1Q5BKU9 147 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
ITGA5-213ENST00000553071 ARPC5LQ9BPX5 153 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 WFDC1Q9HC57 220 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 DNAJC4Q9NNZ3 241 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 TIMM9Q9Y5J7 89 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 TRRAPQ9Y4A5 3859 aa13.04□□□□□ -0.32
ITGA5-213ENST00000553071 HELTA6NFD8 242 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 COX7A2P2O60397 106 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 PFDN1O60925 122 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 MIC13Q5XKP0 118 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 ADAMTSL5Q6ZMM2 481 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 TMEM182Q6ZP80 229 aaPredicted RBP13.03□□□□□ -0.32
ITGA5-213ENST00000553071 GATAD1Q8WUU5 269 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 GPR82Q96P67 336 aa13.03□□□□□ -0.32
ITGA5-213ENST00000553071 BUB3O43684 328 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 SERF2P84101 59 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 C10orf113Q5VZT2 155 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 RNF2Q99496 336 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 PSMG3Q9BT73 122 aaPredicted RBP13.02□□□□□ -0.33
ITGA5-213ENST00000553071 ARV1Q9H2C2 271 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 MLXQ9UH92 298 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 MGAM2Q2M2H8 2515 aa13.02□□□□□ -0.33
ITGA5-213ENST00000553071 EGFEM1PQ0D2K5 195 aa13.01□□□□□ -0.33
ITGA5-213ENST00000553071 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
ITGA5-213ENST00000553071 C16orf54Q6UWD8 224 aa13.01□□□□□ -0.33
ITGA5-213ENST00000553071 OR8I2Q8N0Y5 310 aa13.01□□□□□ -0.33
ITGA5-213ENST00000553071 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
ITGA5-213ENST00000553071 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 TSPAN4O14817 238 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 BCL2L11O43521 198 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 MBP02144 154 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 CXCL2P19875 107 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
ITGA5-213ENST00000553071 TMUB2Q71RG4 321 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
ITGA5-213ENST00000553071 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
ITGA5-213ENST00000553071 DOK5Q9P104 306 aa13□□□□□ -0.33
ITGA5-213ENST00000553071 IGHV3OR16-13A0A075B7E8 117 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 IGHV3-74A0A0B4J1X5 117 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 G3V4G9 280 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
ITGA5-213ENST00000553071 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
ITGA5-213ENST00000553071 RPL11P62913 178 aaKnown RBP12.99□□□□□ -0.33
ITGA5-213ENST00000553071 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
ITGA5-213ENST00000553071 KPRPQ5T749 579 aaPredicted RBP12.99□□□□□ -0.33
ITGA5-213ENST00000553071 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 TCF24Q7RTU0 167 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 LINC00305Q7Z4B0 112 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 HSD17B11Q8NBQ5 300 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 RSG1Q9BU20 258 aa12.99□□□□□ -0.33
ITGA5-213ENST00000553071 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 RPL7P18124 248 aaKnown RBP12.98□□□□□ -0.33
ITGA5-213ENST00000553071 GALR1P47211 349 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 LGALSLQ3ZCW2 172 aaPredicted RBP12.98□□□□□ -0.33
ITGA5-213ENST00000553071 FFAR4Q5NUL3 377 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 ZNF256Q9Y2P7 627 aaPredicted RBP12.98□□□□□ -0.33
ITGA5-213ENST00000553071 PKD1L1Q8TDX9 2849 aa12.98□□□□□ -0.33
ITGA5-213ENST00000553071 IGHV3-66A0A0C4DH42 116 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 OR4C46A6NHA9 309 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 H3BRN7 92 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
ITGA5-213ENST00000553071 M6PRP20645 277 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 EDN2P20800 178 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 ATP6V0CP27449 155 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 MEOX2P50222 304 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 GUCA2BQ16661 112 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 EIF5AL1Q6IS14 154 aaKnown RBP12.97□□□□□ -0.33
ITGA5-213ENST00000553071 SIGLEC15Q6ZMC9 328 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 GLMPQ8WWB7 406 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 ZNF471Q9BX82 626 aaPredicted RBP12.97□□□□□ -0.33
ITGA5-213ENST00000553071 MRPL32Q9BYC8 188 aaKnown RBP12.97□□□□□ -0.33
ITGA5-213ENST00000553071 CYTL1Q9NRR1 136 aa12.97□□□□□ -0.33
ITGA5-213ENST00000553071 DNHD1Q96M86 4753 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms