RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 M0R3E3 92 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 BMPR1BO00238 502 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 ZNF672Q499Z4 452 aaPredicted RBP10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 ZNF329Q86UD4 541 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 NUP35Q8NFH5 326 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 CACNG8Q8WXS5 425 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 SIGLEC9Q9Y336 463 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 IGHV3-66A0A0C4DH42 116 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 C9JCJ5 164 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 M0R2Z0 102 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 IGLV2-23P01705 113 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 P01737 135 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 IL4P05112 153 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 MC5RP33032 325 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 LINC00310P59036 64 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 CX3CL1P78423 397 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 POU2AF1Q16633 256 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 ERASQ7Z444 233 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 Q9H3A6 140 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 IGKV1D-37A0A075B6S9 117 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 ITGB1BP1O14713 200 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
PRPF40B-209ENST00000548825 A0A1B0GWJ7 208 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 IGLC7A0M8Q6 106 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 AMY1AP04745 511 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 ZNF25P17030 456 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 RNASEH2CQ8TDP1 164 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 SERTM2A0A1B0GWG4 89 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 IGLV2-8P01709 118 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 COA6Q5JTJ3 125 aaKnown RBP10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 LINC00322Q6ZN03 302 aaPredicted RBP10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 HIGD1AQ9Y241 93 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 PKD1L2Q7Z442 2459 aa10.93□□□□□ -0.66
PRPF40B-209ENST00000548825 YPEL3P61236 119 aaPredicted RBP10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 LY6DQ14210 128 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 BCL6BQ8N143 479 aaPredicted RBP10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 OR8B3Q8NGG8 313 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 RBM14Q96PK6 669 aaKnown RBP10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 OR8B2Q96RD0 313 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 SONP18583 2426 aaKnown RBP10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 BUB1B-PAK6H3BSN5 160 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 CHEK1O14757 476 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 TMEM183BQ1AE95 376 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 M0R143 59 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 PDLIM4P50479 330 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 CCDC168Q8NDH2 2452 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 ABCA12Q86UK0 2595 aa10.92□□□□□ -0.66
PRPF40B-209ENST00000548825 FLNCQ14315 2725 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 A0A1W2PS18 150 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 GNG7O60262 68 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 LGALS7P47929 136 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 FXYD7P58549 80 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 MRPL32Q9BYC8 188 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 B9A039 149 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 ZNF841Q6ZN19 808 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 Q6ZN92 141 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 SELENOTP62341 195 aa10.91□□□□□ -0.66
PRPF40B-209ENST00000548825 GPX1P07203 203 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 HIST1H1EP10412 219 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 C21orf62-AS1Q17RA5 79 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 ETFRF1Q6IPR1 90 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 LINC00527Q9UJ94 153 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 HTR1DP28221 377 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 ECSCRQ19T08 205 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 LDLRAD2Q5SZI1 272 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 GDF5OSQ5U4N7 250 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 Q6ZVH6 145 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 C11orf42Q8N5U0 333 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 GNB1LQ9BYB4 327 aa10.9□□□□□ -0.66
PRPF40B-209ENST00000548825 IZUMO1RA6ND01 250 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 ZNF207O43670 478 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 OR2J3O76001 311 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 C3orf79P0CE67 100 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 TMEM249Q2WGJ8 235 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 UTP20O75691 2785 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 SIAH2O43255 324 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 FBLN7Q53RD9 439 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 OR2T8A6NH00 312 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 J3KRW8 73 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 ZNF324O75467 553 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 COMPP49747 757 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 TAS2R60P59551 318 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 C1orf194Q5T5A4 169 aa10.89□□□□□ -0.67
PRPF40B-209ENST00000548825 TIMD4Q96H15 378 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms