RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.49
VARS2-211ENST00000541562 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
VARS2-211ENST00000541562 ZNF329Q86UD4 541 aa12.01□□□□□ -0.49
VARS2-211ENST00000541562 RAB9BQ9NP90 201 aa12.01□□□□□ -0.49
VARS2-211ENST00000541562 LOC389332A0A1B0GUA5 103 aa12.01□□□□□ -0.49
VARS2-211ENST00000541562 VSTM5A8MXK1 200 aa12.01□□□□□ -0.49
VARS2-211ENST00000541562 A0A1W2PS18 150 aa12□□□□□ -0.49
VARS2-211ENST00000541562 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
VARS2-211ENST00000541562 SIAH2O43255 324 aa12□□□□□ -0.49
VARS2-211ENST00000541562 TYMSP04818 313 aa12□□□□□ -0.49
VARS2-211ENST00000541562 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.494e-6■■■■□ 25.4
VARS2-211ENST00000541562 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
VARS2-211ENST00000541562 DAZAP1Q96EP5 407 aaKnown RBP12□□□□□ -0.49
VARS2-211ENST00000541562 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
VARS2-211ENST00000541562 AMY1AP04745 511 aa12□□□□□ -0.49
VARS2-211ENST00000541562 IGFL3Q6UXB1 125 aa12□□□□□ -0.49
VARS2-211ENST00000541562 SRSF12Q8WXF0 261 aaKnown RBP12□□□□□ -0.49
VARS2-211ENST00000541562 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
VARS2-211ENST00000541562 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
VARS2-211ENST00000541562 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
VARS2-211ENST00000541562 TEX36Q5VZQ5 186 aa12□□□□□ -0.49
VARS2-211ENST00000541562 M0R2Z0 102 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 HYPMO75409 117 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 HINT1P49773 126 aaPredicted RBP11.99□□□□□ -0.49
VARS2-211ENST00000541562 TDGF1P3P51864 188 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 BPIFB3P59826 476 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 PPP1R27Q86WC6 154 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 FXYD5Q96DB9 178 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 Q9H3A6 140 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 IGLC7A0M8Q6 106 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 IL4P05112 153 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
VARS2-211ENST00000541562 BRS3P32247 399 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 ZNF672Q499Z4 452 aaPredicted RBP11.99□□□□□ -0.49
VARS2-211ENST00000541562 ZNF586Q9NXT0 402 aa11.99□□□□□ -0.49
VARS2-211ENST00000541562 C3orf79P0CE67 100 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 CX3CL1P78423 397 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 FAM90A9PA6NNJ1 464 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 COL8A1P27658 744 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 PPIFP30405 207 aaKnown RBP11.98□□□□□ -0.49
VARS2-211ENST00000541562 C22orf15Q8WYQ4 148 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 RASL11BQ9BPW5 248 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 SIGLEC9Q9Y336 463 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 SPRY2O43597 315 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 TMEM167AQ8TBQ9 72 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 TMEM186Q96B77 213 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 OR8B2Q96RD0 313 aa11.98□□□□□ -0.49
VARS2-211ENST00000541562 GPX1P07203 203 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 TPTE2P1Q5T6R2 138 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 Q6ZN92 141 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 Q8TAT8 98 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 ZC2HC1AQ96GY0 325 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 ARL2-SNX15V9GYD0 113 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 APOBEC3AP31941 199 aaPredicted RBP11.97□□□□□ -0.49
VARS2-211ENST00000541562 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 TSKUQ8WUA8 353 aa11.97□□□□□ -0.49
VARS2-211ENST00000541562 RBM14Q96PK6 669 aaKnown RBP11.97□□□□□ -0.49
VARS2-211ENST00000541562 OR2T8A6NH00 312 aa11.96□□□□□ -0.49
VARS2-211ENST00000541562 OR2J3O76001 311 aa11.96□□□□□ -0.49
VARS2-211ENST00000541562 P01737 135 aa11.96□□□□□ -0.49
VARS2-211ENST00000541562 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.49
VARS2-211ENST00000541562 M0R143 59 aa11.96□□□□□ -0.5
VARS2-211ENST00000541562 CD99P14209 185 aa11.96□□□□□ -0.5
VARS2-211ENST00000541562 PDLIM4P50479 330 aa11.96□□□□□ -0.5
VARS2-211ENST00000541562 AARDQ4LEZ3 155 aa11.96□□□□□ -0.5
VARS2-211ENST00000541562 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.5
VARS2-211ENST00000541562 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.5
VARS2-211ENST00000541562 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 TAS2R60P59551 318 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 COA6Q5JTJ3 125 aaKnown RBP11.95□□□□□ -0.5
VARS2-211ENST00000541562 SSX8Q7RTT4 187 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 NUP37Q8NFH4 326 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 FAM169BQ8N8A8 192 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 PERPQ96FX8 193 aa11.95□□□□□ -0.5
VARS2-211ENST00000541562 A0A1W2PRE2 83 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 NGBQ9NPG2 151 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 HIGD1AQ9Y241 93 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C9JCJ5 164 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 MEF2CQ06413 473 aaPredicted RBP11.94□□□□□ -0.5
VARS2-211ENST00000541562 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 hDV102S1A0JD36 115 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 CHEK1O14757 476 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 PRRX1P54821 245 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C1orf194Q5T5A4 169 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 C1orf174Q8IYL3 243 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 DYNAPQ8N1N2 210 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms