RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EIF2B2P49770 351 aaKnown RBP2.55□□□□□ -2
SKP1-209ENST00000522552 SUPT4H1P63272 117 aaKnown RBP2.55□□□□□ -2
SKP1-209ENST00000522552 QRFPP83859 136 aa2.55□□□□□ -2
SKP1-209ENST00000522552 ZNF816Q0VGE8 651 aaPredicted RBP2.55□□□□□ -2
SKP1-209ENST00000522552 ZNF79Q15937 498 aa2.55□□□□□ -2
SKP1-209ENST00000522552 SOSTDC1Q6X4U4 206 aa2.55□□□□□ -2
SKP1-209ENST00000522552 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.55□□□□□ -2
SKP1-209ENST00000522552 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
SKP1-209ENST00000522552 PFN4Q8NHR9 129 aa2.55□□□□□ -2
SKP1-209ENST00000522552 UBALD1Q8TB05 177 aa2.55□□□□□ -2
SKP1-209ENST00000522552 SDF2Q99470 211 aa2.55□□□□□ -2
SKP1-209ENST00000522552 GINS4Q9BRT9 223 aa2.55□□□□□ -2
SKP1-209ENST00000522552 PSMG3Q9BT73 122 aaPredicted RBP2.55□□□□□ -2
SKP1-209ENST00000522552 SOX21Q9Y651 276 aaPredicted RBP2.55□□□□□ -2
SKP1-209ENST00000522552 NUP98P52948 1817 aa2.55□□□□□ -2
SKP1-209ENST00000522552 COL5A2P05997 1499 aaPredicted RBP2.55□□□□□ -2
SKP1-209ENST00000522552 NCAPD3P42695 1498 aa2.55□□□□□ -2
SKP1-209ENST00000522552 MBD5Q9P267 1494 aa2.55□□□□□ -2
SKP1-209ENST00000522552 GREB1Q4ZG55 1949 aa2.55□□□□□ -2
SKP1-209ENST00000522552 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
SKP1-209ENST00000522552 A0A0J9YW62 118 aa2.54□□□□□ -2
SKP1-209ENST00000522552 WISP3O95389 354 aaPredicted RBP2.54□□□□□ -2
SKP1-209ENST00000522552 APODP05090 189 aa2.54□□□□□ -2
SKP1-209ENST00000522552 RPL28P46779 137 aaKnown RBP2.54□□□□□ -2
SKP1-209ENST00000522552 PPP3R1P63098 170 aa2.54□□□□□ -2
SKP1-209ENST00000522552 FOXF1Q12946 379 aa2.54□□□□□ -2
SKP1-209ENST00000522552 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.54□□□□□ -2
SKP1-209ENST00000522552 GTSCR1Q86UQ5 136 aa2.54□□□□□ -2
SKP1-209ENST00000522552 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
SKP1-209ENST00000522552 OR5H6Q8NGV6 325 aa2.54□□□□□ -2
SKP1-209ENST00000522552 PRELID3AQ96N28 172 aa2.54□□□□□ -2
SKP1-209ENST00000522552 ZNF714Q96N38 554 aa2.54□□□□□ -2
SKP1-209ENST00000522552 ZFP30Q9Y2G7 519 aa2.54□□□□□ -2
SKP1-209ENST00000522552 TMEM2Q9UHN6 1383 aa2.54□□□□□ -2
SKP1-209ENST00000522552 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
SKP1-209ENST00000522552 YEATS2Q9ULM3 1422 aa2.54□□□□□ -2
SKP1-209ENST00000522552 BCL9LQ86UU0 1499 aa2.54□□□□□ -2
SKP1-209ENST00000522552 TRPM3Q9HCF6 1732 aaPredicted RBP2.54□□□□□ -2
SKP1-209ENST00000522552 COL27A1Q8IZC6 1860 aaPredicted RBP2.54□□□□□ -2
SKP1-209ENST00000522552 ATG2AQ2TAZ0 1938 aa2.54□□□□□ -2
SKP1-209ENST00000522552 IGLV4-69A0A075B6H9 119 aa2.53□□□□□ -2
SKP1-209ENST00000522552 OR2T8A6NH00 312 aa2.53□□□□□ -2
SKP1-209ENST00000522552 C16orf90A8MZG2 172 aa2.53□□□□□ -2
SKP1-209ENST00000522552 IGHV3-53P01767 116 aa2.53□□□□□ -2
SKP1-209ENST00000522552 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
SKP1-209ENST00000522552 CD24P25063 80 aa2.53□□□□□ -2
SKP1-209ENST00000522552 GUCA1AP43080 201 aaPredicted RBP2.53□□□□□ -2
SKP1-209ENST00000522552 Q6ZR54 194 aa2.53□□□□□ -2
SKP1-209ENST00000522552 RPS19BP1Q86WX3 136 aaKnown RBP2.53□□□□□ -2
SKP1-209ENST00000522552 ST20-AS1Q8NBB2 130 aa2.53□□□□□ -2
SKP1-209ENST00000522552 APCDD1LQ8NCL9 501 aa2.53□□□□□ -2
SKP1-209ENST00000522552 MORN4Q8NDC4 146 aa2.53□□□□□ -2
SKP1-209ENST00000522552 OR10P1Q8NGE3 313 aa2.53□□□□□ -2
SKP1-209ENST00000522552 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
SKP1-209ENST00000522552 DEDD2Q8WXF8 326 aa2.53□□□□□ -2
SKP1-209ENST00000522552 PRDM2Q13029 1718 aa2.53□□□□□ -2
SKP1-209ENST00000522552 ARHGEF28Q8N1W1 1705 aaKnown RBP2.53□□□□□ -2
SKP1-209ENST00000522552 SCN4AP35499 1836 aa2.53□□□□□ -2
SKP1-209ENST00000522552 K7EM74 188 aa2.53□□□□□ -2
SKP1-209ENST00000522552 RER1O15258 196 aa2.53□□□□□ -2
SKP1-209ENST00000522552 CREBL2O60519 120 aaPredicted RBP2.53□□□□□ -2
SKP1-209ENST00000522552 MT-ND6P03923 174 aa2.53□□□□□ -2
SKP1-209ENST00000522552 MSMBP08118 114 aa2.53□□□□□ -2
SKP1-209ENST00000522552 CISD3P0C7P0 127 aa2.53□□□□□ -2
SKP1-209ENST00000522552 ZNF19P17023 458 aa2.53□□□□□ -2
SKP1-209ENST00000522552 DYNLT1P63172 113 aa2.53□□□□□ -2
SKP1-209ENST00000522552 NDPQ00604 133 aa2.53□□□□□ -2
SKP1-209ENST00000522552 ZNF117Q03924 483 aa2.53□□□□□ -2
SKP1-209ENST00000522552 MRGPRG-AS1Q2M3A8 158 aa2.53□□□□□ -2
SKP1-209ENST00000522552 NOXRED1Q6NXP6 359 aa2.53□□□□□ -2
SKP1-209ENST00000522552 ZNF880Q6PDB4 577 aa2.53□□□□□ -2
SKP1-209ENST00000522552 C7orf65Q6ZTY9 151 aa2.53□□□□□ -2
SKP1-209ENST00000522552 SNX29P2Q8IUI4 249 aa2.53□□□□□ -2
SKP1-209ENST00000522552 RNF182Q8N6D2 247 aa2.53□□□□□ -2
SKP1-209ENST00000522552 Q8NDZ9 215 aa2.53□□□□□ -2
SKP1-209ENST00000522552 OR5D14Q8NGL3 314 aa2.53□□□□□ -2
SKP1-209ENST00000522552 KLF14Q8TD94 323 aaPredicted RBP2.53□□□□□ -2
SKP1-209ENST00000522552 PP6455Q8WZ26 134 aa2.53□□□□□ -2
SKP1-209ENST00000522552 FGF13Q92913 245 aa2.53□□□□□ -2
SKP1-209ENST00000522552 OR4C12Q96R67 309 aa2.53□□□□□ -2
SKP1-209ENST00000522552 TMEM191AQ9H0A3 160 aa2.53□□□□□ -2
SKP1-209ENST00000522552 ASF1BQ9NVP2 202 aa2.53□□□□□ -2
SKP1-209ENST00000522552 BOKQ9UMX3 212 aaPredicted RBP2.53□□□□□ -2
SKP1-209ENST00000522552 FAM135BQ49AJ0 1406 aa2.53□□□□□ -2
SKP1-209ENST00000522552 TCOF1Q13428 1488 aaKnown RBP2.53□□□□□ -2
SKP1-209ENST00000522552 PIK3C2AO00443 1686 aa2.53□□□□□ -2.01
SKP1-209ENST00000522552 SBF1O95248 1867 aa2.53□□□□□ -2.01
SKP1-209ENST00000522552 MYO5AQ9Y4I1 1855 aaKnown RBP2.52□□□□□ -2.01
SKP1-209ENST00000522552 RIMBP3CA6NJZ7 1639 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 RIMBP3BA6NNM3 1639 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 RIMBP3Q9UFD9 1639 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 IGLV3-9A0A075B6K5 115 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 PVALEFA0A1B0GWK0 134 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 UQCRQO14949 82 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 TCL1BO95988 128 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 IL4P05112 153 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 AKAIN1P0CW23 69 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 DNAH10OSP0CZ25 163 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 GZMBP10144 247 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 MYL5Q02045 173 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms