RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 LYZP61626 148 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 LAMTOR1Q6IAA8 161 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 Q8N1Y9 231 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 AQP10Q96PS8 301 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
VEGFA-222ENST00000520948 IGHV3-66A0A0C4DH42 116 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 DFFBO76075 338 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 FRMD6-AS1P0C7T7 363 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 CAMLGP49069 296 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 PRR20EP86478 221 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 PRR20CP86479 221 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 PRR20DP86480 221 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 PRR20BP86481 221 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 PRR20AP86496 221 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 RBPMS2Q6ZRY4 209 aaKnown RBP13.57□□□□□ -0.24
VEGFA-222ENST00000520948 GLMPQ8WWB7 406 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 NEURL2Q9BR09 285 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 GGTLC1Q9BX51 225 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 TMEM231Q9H6L2 316 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 WFDC1Q9HC57 220 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 TNFSF18Q9UNG2 199 aa13.57□□□□□ -0.24
VEGFA-222ENST00000520948 TENM2Q9NT68 2774 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 UBE2L5PA0A1B0GUS4 154 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 MPDU1O75352 247 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 RPL29P47914 159 aaKnown RBP13.56□□□□□ -0.24
VEGFA-222ENST00000520948 RAB31Q13636 194 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 CLINT1Q14677 625 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 OPCMLQ14982 345 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 PATE2Q6UY27 113 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 TCF24Q7RTU0 167 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 ZNF546Q86UE3 836 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 NARS2Q96I59 477 aaKnown RBP13.56□□□□□ -0.24
VEGFA-222ENST00000520948 ATP5SQ99766 215 aa13.56□□□□□ -0.24
VEGFA-222ENST00000520948 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-222ENST00000520948 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 RNF222A6NCQ9 220 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 ORM2P19652 201 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 FGF7P21781 194 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 PXDC1Q5TGL8 231 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 GRAMD2BQ96HH9 432 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 ST6GAL2Q96JF0 529 aa13.55□□□□□ -0.24
VEGFA-222ENST00000520948 WDR61Q9GZS3 305 aaKnown RBP13.55□□□□□ -0.24
VEGFA-222ENST00000520948 SMLR1H3BR10 107 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 C1orf194Q5T5A4 169 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 OR1B1Q8NGR6 318 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 PARD6GQ9BYG4 376 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-222ENST00000520948 SMIM3Q9BZL3 60 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 PFDN2Q9UHV9 154 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 SACSQ9NZJ4 4579 aa13.54□□□□□ -0.24
VEGFA-222ENST00000520948 FXYD6-FXYD2A0A087WZ82 144 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 HYPMO75409 117 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 CD7P09564 240 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 NUP62P37198 522 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-222ENST00000520948 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 ARL6Q9H0F7 186 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 ZMAT4Q9H898 229 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 C19orf73Q9NVV2 129 aa13.53□□□□□ -0.24
VEGFA-222ENST00000520948 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 H3BRN7 92 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 OR11H4Q8NGC9 324 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 SHANK2-AS3Q9BTD1 123 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 SLC25A39Q9BZJ4 359 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-222ENST00000520948 MS4A6AQ9H2W1 248 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 DOK5Q9P104 306 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 FBXL17Q9UF56 701 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 HIGD1AQ9Y241 93 aa13.52□□□□□ -0.25
VEGFA-222ENST00000520948 HELTA6NFD8 242 aa13.51□□□□□ -0.25
VEGFA-222ENST00000520948 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-222ENST00000520948 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
VEGFA-222ENST00000520948 INO80EQ8NBZ0 244 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-222ENST00000520948 ARV1Q9H2C2 271 aa13.51□□□□□ -0.25
VEGFA-222ENST00000520948 SLC39A9Q9NUM3 307 aa13.51□□□□□ -0.25
VEGFA-222ENST00000520948 PXMP4Q9Y6I8 212 aa13.51□□□□□ -0.25
VEGFA-222ENST00000520948 ELOA3CA0A087WX78 387 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-222ENST00000520948 LCE6AA0A183 80 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 A0A1B0GVG6 124 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 HMSDA8MTL9 139 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 A8MZ25 164 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 IFNA5P01569 189 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 OR5G3P0C626 314 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 CD81P60033 236 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 B2MP61769 119 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 PAFAH1B2P68402 229 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 Q6ZRG5 221 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 GTSCR1Q86UQ5 136 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 GBGT1Q8N5D6 347 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 DCANP1Q8TF63 244 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 C17orf77Q96MU5 243 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 FAM110AQ9BQ89 295 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 DNAJC4Q9NNZ3 241 aa13.5□□□□□ -0.25
VEGFA-222ENST00000520948 IGKV3-7A0A075B6H7 116 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 K7EQG2 157 aa13.49□□□□□ -0.25
VEGFA-222ENST00000520948 S100A7P31151 101 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms