RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GATCO43716 136 aaKnown RBP20.29■□□□□ 0.84
COL13A1-213ENST00000520267 EBI3Q14213 229 aa20.29■□□□□ 0.84
COL13A1-213ENST00000520267 TMEM136Q6ZRR5 245 aa20.29■□□□□ 0.84
COL13A1-213ENST00000520267 ATG101Q9BSB4 218 aa20.29■□□□□ 0.84
COL13A1-213ENST00000520267 TMEM14CQ9P0S9 112 aa20.29■□□□□ 0.84
COL13A1-213ENST00000520267 MRPL54Q6P161 138 aaKnown RBP20.29■□□□□ 0.84
COL13A1-213ENST00000520267 NPIPB5A8MRT5 1133 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 CRISP2P16562 243 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 BPESC1Q9GZL8 116 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 MED13LQ71F56 2210 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 IGLV11-55A0A075B6I3 123 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 TOX4O94842 621 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 RPL19P84098 196 aaKnown RBP20.28■□□□□ 0.84
COL13A1-213ENST00000520267 NAT8BQ9UHF3 227 aa20.28■□□□□ 0.84
COL13A1-213ENST00000520267 IZUMO1RA6ND01 250 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 TCRAP04437 139 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 TMEM11P17152 192 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 WDR73Q6P4I2 378 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 ZNF491Q8N8L2 437 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 TBX15Q96SF7 602 aa20.27■□□□□ 0.84
COL13A1-213ENST00000520267 TOMM40O96008 361 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 HIST1H1EP10412 219 aaKnown RBP20.27■□□□□ 0.83
COL13A1-213ENST00000520267 LINC00310P59036 64 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 LMO4P61968 165 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 C9orf152Q5JTZ5 239 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 GRAMD2BQ96HH9 432 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 GPR82Q96P67 336 aa20.27■□□□□ 0.83
COL13A1-213ENST00000520267 AMY1AP04745 511 aa20.26■□□□□ 0.83
COL13A1-213ENST00000520267 TTC9CQ8N5M4 171 aa20.26■□□□□ 0.83
COL13A1-213ENST00000520267 TMEM68Q96MH6 324 aa20.26■□□□□ 0.83
COL13A1-213ENST00000520267 SHANK2-AS3Q9BTD1 123 aa20.26■□□□□ 0.83
COL13A1-213ENST00000520267 MLST8Q9BVC4 326 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 PIEZO1Q92508 2521 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 CSMD1Q96PZ7 3565 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 H3BRN7 92 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 MT-ND6P03923 174 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 IL4P05112 153 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 FAM120AOSQ5T036 256 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 EXOC3-AS1Q8N2X6 119 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 CMTM2Q8TAZ6 248 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 RNF125Q96EQ8 232 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 FMC1Q96HJ9 113 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 AJUBAQ96IF1 538 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 OTORQ9NRC9 128 aa20.25■□□□□ 0.83
COL13A1-213ENST00000520267 F2Z2F3 143 aa20.24■□□□□ 0.83
COL13A1-213ENST00000520267 RAB4BP61018 213 aa20.24■□□□□ 0.83
COL13A1-213ENST00000520267 GNG7O60262 68 aa20.24■□□□□ 0.83
COL13A1-213ENST00000520267 COX19Q49B96 90 aa20.24■□□□□ 0.83
COL13A1-213ENST00000520267 SMIM12Q96EX1 92 aa20.24■□□□□ 0.83
COL13A1-213ENST00000520267 TBL2Q9Y4P3 447 aaKnown RBP20.24■□□□□ 0.83
COL13A1-213ENST00000520267 WI2-2373I1.2A0A1W2PRP0 233 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 EGR2P11161 476 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-213ENST00000520267 UBE2E1P51965 193 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 KIAA1644Q3SXP7 199 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 LINC00322Q6ZN03 302 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-213ENST00000520267 F8W735 103 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-213ENST00000520267 LTAP01374 205 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 MFAP4P55083 255 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 BCL6BQ8N143 479 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-213ENST00000520267 C17orf77Q96MU5 243 aa20.23■□□□□ 0.83
COL13A1-213ENST00000520267 IGHV7-81A0A0B4J1V7 117 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 SERF1AO75920 110 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 Q8N9W7 124 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 PRO1933Q9H354 126 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 OVOL3O00110 214 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 Q0VG73 95 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 USF2Q15853 346 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-213ENST00000520267 BPIFA4PQ86YQ2 179 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 NUP35Q8NFH5 326 aa20.22■□□□□ 0.83
COL13A1-213ENST00000520267 ASH1LQ9NR48 2969 aaKnown RBP20.21■□□□□ 0.83
COL13A1-213ENST00000520267 TRAV30A0A087WSZ9 112 aa20.21■□□□□ 0.83
COL13A1-213ENST00000520267 NDUFB8O95169 186 aa20.21■□□□□ 0.83
COL13A1-213ENST00000520267 CHRDL1Q9BU40 450 aa20.21■□□□□ 0.83
COL13A1-213ENST00000520267 AKAP6Q13023 2319 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 IGHV3-23P01764 117 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 BAGE3Q86Y29 109 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 TRBV19A0A075B6N1 114 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 TRAV8-1A0A0A6YYK1 113 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 HLA-DQA1P01909 254 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 FAM106CPP0CH98 169 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 IGLC2P0DOY2 106 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 ESDP10768 282 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 FCGR2BP31994 310 aaPredicted RBP20.2■□□□□ 0.82
COL13A1-213ENST00000520267 PKIAP61925 76 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 Q56UQ5 140 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 TSKUQ8WUA8 353 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 ZNF48Q96MX3 618 aaPredicted RBP20.2■□□□□ 0.82
COL13A1-213ENST00000520267 GNB4Q9HAV0 340 aa20.2■□□□□ 0.82
COL13A1-213ENST00000520267 ZNF331Q9NQX6 463 aaPredicted RBP20.2■□□□□ 0.82
COL13A1-213ENST00000520267 OR2J3O76001 311 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 SAA4P35542 130 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 NEU1Q99519 415 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 C21orf62Q9NYP8 219 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 BMPR1BO00238 502 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 MRPS12O15235 138 aaKnown RBP20.19■□□□□ 0.82
COL13A1-213ENST00000520267 OR4F17Q8NGA8 305 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 LPAR2Q9HBW0 351 aa20.19■□□□□ 0.82
COL13A1-213ENST00000520267 GOLT1AQ6ZVE7 132 aa20.18■□□□□ 0.82
COL13A1-213ENST00000520267 HSPB9Q9BQS6 159 aa20.18■□□□□ 0.82
COL13A1-213ENST00000520267 IGLV2-11P01706 119 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms